Detailed information
Bioinformatically predicted
Overview
| Name | comA | Type | Regulator |
| Locus tag | KSO_RS12840 | Genome accession | NC_020272 |
| Coordinates | 2710331..2710996 (-) | Length | 221 a.a. |
| NCBI ID | WP_003154892.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens IT-45 | ||
| Function | promoting transcription of comS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2705331..2715996
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KSO_RS12830 (KSO_013310) | - | 2706690..2709872 (-) | 3183 | WP_015388361.1 | type 2 lanthipeptide synthetase LanM family protein | - |
| KSO_RS12835 (KSO_013315) | - | 2709957..2710139 (-) | 183 | WP_003154891.1 | plantaricin C family lantibiotic | - |
| KSO_RS12840 (KSO_013320) | comA | 2710331..2710996 (-) | 666 | WP_003154892.1 | response regulator transcription factor | Regulator |
| KSO_RS20445 (KSO_013325) | - | 2711008..2711742 (-) | 735 | WP_015388362.1 | sensor histidine kinase | - |
| KSO_RS20450 (KSO_013330) | - | 2711658..2712257 (-) | 600 | WP_015388363.1 | hypothetical protein | - |
| KSO_RS12850 (KSO_013335) | - | 2712323..2712514 (-) | 192 | WP_003154894.1 | hypothetical protein | - |
| KSO_RS12855 (KSO_013340) | - | 2712532..2713263 (-) | 732 | WP_003154895.1 | ABC transporter permease | - |
| KSO_RS12860 (KSO_013345) | - | 2713244..2714179 (-) | 936 | WP_015388364.1 | ABC transporter ATP-binding protein | - |
| KSO_RS12865 (KSO_013350) | - | 2714299..2715657 (-) | 1359 | WP_003154898.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 25144.33 Da Isoelectric Point: 6.2410
>NTDB_id=45948 KSO_RS12840 WP_003154892.1 2710331..2710996(-) (comA) [Bacillus amyloliquefaciens IT-45]
MIKILLIDDHIGVAQGTKAILEKSNKMGVTILSCCKEVLNHLKHYEYDLILLDLYMPELNGMELSKMILRESPDQKIIIY
TGFDISVHFNLLVEVGVSGFISKSSTEEHMIKVIESVIEGDTIIPTHLFKQLRRTEANTFNIDKLEDRIRDITLNEREQD
ILAGVAEGMTNRELSAKLLISQRAVEYILTGVYNKLGVKSRTEALIKANRYSLISMKTIYE
MIKILLIDDHIGVAQGTKAILEKSNKMGVTILSCCKEVLNHLKHYEYDLILLDLYMPELNGMELSKMILRESPDQKIIIY
TGFDISVHFNLLVEVGVSGFISKSSTEEHMIKVIESVIEGDTIIPTHLFKQLRRTEANTFNIDKLEDRIRDITLNEREQD
ILAGVAEGMTNRELSAKLLISQRAVEYILTGVYNKLGVKSRTEALIKANRYSLISMKTIYE
Nucleotide
Download Length: 666 bp
>NTDB_id=45948 KSO_RS12840 WP_003154892.1 2710331..2710996(-) (comA) [Bacillus amyloliquefaciens IT-45]
ATGATAAAGATTCTATTAATTGATGATCATATTGGTGTTGCTCAAGGGACAAAAGCCATTCTTGAAAAAAGCAATAAAAT
GGGAGTAACAATATTGTCTTGCTGTAAAGAAGTACTTAATCACCTTAAGCATTATGAGTATGACTTAATTTTACTTGATT
TATATATGCCGGAGTTAAATGGAATGGAATTGTCAAAAATGATTCTTAGAGAGAGCCCCGATCAAAAAATTATAATTTAT
ACTGGTTTTGATATCTCTGTGCATTTCAATCTTTTGGTTGAAGTTGGTGTTTCCGGGTTCATAAGTAAGTCATCAACAGA
AGAACATATGATAAAAGTAATTGAAAGTGTCATTGAGGGAGATACCATTATTCCTACTCATCTCTTTAAACAATTAAGAA
GAACAGAAGCAAATACGTTCAACATTGATAAGCTTGAAGATAGAATAAGAGATATTACTTTAAATGAAAGAGAACAAGAT
ATCTTAGCGGGCGTAGCGGAGGGAATGACAAACCGGGAATTATCAGCAAAGCTGTTGATCAGTCAAAGAGCGGTTGAATA
CATTCTTACTGGTGTGTACAACAAGCTCGGAGTAAAATCCAGAACAGAGGCACTGATCAAAGCAAATCGATATTCATTAA
TTTCTATGAAAACTATATATGAGTAA
ATGATAAAGATTCTATTAATTGATGATCATATTGGTGTTGCTCAAGGGACAAAAGCCATTCTTGAAAAAAGCAATAAAAT
GGGAGTAACAATATTGTCTTGCTGTAAAGAAGTACTTAATCACCTTAAGCATTATGAGTATGACTTAATTTTACTTGATT
TATATATGCCGGAGTTAAATGGAATGGAATTGTCAAAAATGATTCTTAGAGAGAGCCCCGATCAAAAAATTATAATTTAT
ACTGGTTTTGATATCTCTGTGCATTTCAATCTTTTGGTTGAAGTTGGTGTTTCCGGGTTCATAAGTAAGTCATCAACAGA
AGAACATATGATAAAAGTAATTGAAAGTGTCATTGAGGGAGATACCATTATTCCTACTCATCTCTTTAAACAATTAAGAA
GAACAGAAGCAAATACGTTCAACATTGATAAGCTTGAAGATAGAATAAGAGATATTACTTTAAATGAAAGAGAACAAGAT
ATCTTAGCGGGCGTAGCGGAGGGAATGACAAACCGGGAATTATCAGCAAAGCTGTTGATCAGTCAAAGAGCGGTTGAATA
CATTCTTACTGGTGTGTACAACAAGCTCGGAGTAAAATCCAGAACAGAGGCACTGATCAAAGCAAATCGATATTCATTAA
TTTCTATGAAAACTATATATGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comA | Bacillus subtilis subsp. subtilis str. 168 |
41.232 |
95.475 |
0.394 |