Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   I6J13_RS04315 Genome accession   NZ_CP068213
Coordinates   908429..909382 (+) Length   317 a.a.
NCBI ID   WP_006269745.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 903429..914382
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS04295 (I6J13_04295) - 905496..906188 (-) 693 WP_003036126.1 phosphoglycerate mutase -
  I6J13_RS04300 (I6J13_04300) - 906326..906787 (-) 462 WP_003035860.1 Fur family transcriptional regulator -
  I6J13_RS04305 (I6J13_04305) - 906956..907231 (-) 276 WP_003036014.1 HU family DNA-binding protein -
  I6J13_RS04310 (I6J13_04310) - 907360..908193 (-) 834 WP_006269763.1 DegV family protein -
  I6J13_RS04315 (I6J13_04315) ceuB 908429..909382 (+) 954 WP_006269745.1 ABC transporter permease Machinery gene
  I6J13_RS04320 (I6J13_04320) - 909375..910337 (+) 963 WP_006269749.1 iron chelate uptake ABC transporter family permease subunit -
  I6J13_RS04325 (I6J13_04325) - 910338..911090 (+) 753 WP_006269739.1 ABC transporter ATP-binding protein -
  I6J13_RS04330 (I6J13_04330) - 911112..912083 (+) 972 WP_003068226.1 siderophore ABC transporter substrate-binding protein -
  I6J13_RS04335 (I6J13_04335) - 912146..912877 (-) 732 WP_006269744.1 metallophosphoesterase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35351.20 Da        Isoelectric Point: 10.0791

>NTDB_id=459117 I6J13_RS04315 WP_006269745.1 908429..909382(+) (ceuB) [Streptococcus constellatus strain FDAARGOS_1156]
MKQTKFLGILCLILAFISIMVGASSFSWHKLLSGETNTWLLFLESRLPRTISIILAGSSMSIAGLLMQTVTQNHFAAPST
IGTVNAAKFGMLLSLFFFPTANLAQKMLFAFVSSIFFTIIFIRFIRKLSFKEKWLLPLVGIIYSGVISAAAEILAYRFDL
VQSMTSWTQGSFAMIQTHQYEWLFLSFVILIAVWRLSATFTIMNLGEDASHNLGISFYQMEGLSLFLIALTTSVTMITVG
SLPFIGVIIPNIVRKFYGDHITRIKSITALTGAGLILICDIMSRMVIRPYEISVSLILGIFGSLTFIYLLWRGATHE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=459117 I6J13_RS04315 WP_006269745.1 908429..909382(+) (ceuB) [Streptococcus constellatus strain FDAARGOS_1156]
ATGAAACAGACAAAATTTTTAGGAATTCTTTGTCTTATACTGGCTTTCATTTCAATTATGGTTGGTGCTAGCAGTTTTTC
TTGGCATAAACTACTCAGTGGTGAGACTAACACTTGGCTATTATTTTTAGAGTCGCGCTTACCAAGGACTATTAGTATCA
TTTTAGCAGGATCTAGCATGAGTATTGCGGGACTTCTGATGCAAACTGTTACACAGAATCATTTTGCGGCGCCTAGTACA
ATTGGAACAGTAAATGCTGCAAAGTTCGGTATGCTTCTCAGCCTCTTCTTCTTTCCAACGGCGAATTTGGCTCAAAAAAT
GCTCTTCGCCTTTGTCTCTTCTATTTTTTTTACGATTATTTTTATTAGATTTATCAGAAAATTATCATTTAAGGAAAAAT
GGTTACTGCCACTTGTCGGAATTATTTATAGTGGTGTCATTAGCGCAGCTGCTGAAATTCTTGCCTATCGTTTTGATCTA
GTGCAAAGTATGACATCGTGGACGCAAGGATCTTTTGCAATGATTCAGACACATCAATATGAGTGGCTTTTTTTGAGTTT
TGTTATTCTGATTGCTGTCTGGCGGTTGTCTGCTACTTTTACAATTATGAATCTAGGAGAAGATGCTAGCCATAATCTAG
GGATATCTTTTTATCAAATGGAAGGATTGAGCCTATTTCTCATTGCTCTCACAACCAGTGTGACAATGATTACAGTGGGC
TCGCTTCCTTTCATAGGCGTGATTATACCAAATATTGTGCGAAAATTTTATGGAGATCATATCACGCGTATCAAAAGTAT
TACTGCCCTGACGGGAGCAGGCTTAATTTTAATCTGTGATATTATGTCACGTATGGTGATCCGTCCCTATGAAATCTCAG
TTAGTTTGATTCTGGGAATTTTTGGAAGTTTAACATTCATTTATCTTTTATGGCGAGGTGCCACTCATGAATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

38.141

98.423

0.375