Detailed information NTG0459100

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: I6J13_RS01865
• Genome accession: NZ_CP068213
• Coordinates: 385066..386178 (+)
• Length: 370 a.a.
• NCBI ID: WP_003031450.1
• Uniprot ID: A0A380L3U2
• Organism: Streptococcus constellatus strain FDAARGOS_1156
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 380066..391178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J13_RS01845 (I6J13_01845)	-	381966..382304 (+)	339	WP_003069168.1	ATP cone domain-containing protein	-
I6J13_RS01850 (I6J13_01850)	rpsU	382466..382642 (+)	177	WP_000048054.1	30S ribosomal protein S21	-
I6J13_RS01855 (I6J13_01855)	mscL	382756..383133 (-)	378	WP_006269480.1	large conductance mechanosensitive channel protein MscL	-
I6J13_RS01860 (I6J13_01860)	dnaG	383288..385063 (+)	1776	WP_006269558.1	DNA primase	-
I6J13_RS01865 (I6J13_01865)	rpoS	385066..386178 (+)	1113	WP_003031450.1	RNA polymerase sigma factor RpoD	Regulator
I6J13_RS01870 (I6J13_01870)	-	386197..386526 (+)	330	WP_003069160.1	metal-sulfur cluster assembly factor	-
I6J13_RS01875 (I6J13_01875)	brnQ	386669..387997 (+)	1329	WP_006269526.1	branched-chain amino acid transport system II carrier protein	-
I6J13_RS01880 (I6J13_01880)	ccdA2	388138..388848 (+)	711	WP_003069152.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
I6J13_RS01885 (I6J13_01885)	-	388865..389449 (+)	585	WP_006269481.1	redoxin family protein	-
I6J13_RS01890 (I6J13_01890)	msrB	389462..390571 (+)	1110	WP_006269564.1	peptide-methionine (R)-S-oxide reductase MsrB	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42396.02 Da
• Isoelectric Point: 4.4553

>NTDB_id=459100 I6J13_RS01865 WP_003031450.1 385066..386178(+) (rpoS) [Streptococcus constellatus strain FDAARGOS_1156]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDQLVIPFTLNADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=459100 I6J13_RS01865 WP_003031450.1 385066..386178(+) (rpoS) [Streptococcus constellatus strain FDAARGOS_1156]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAGATCAATGATCAATTAGTCATTCCATTTACTTTAAATGCTGATGGTATTGAGGATCTTCTTCAAC
GAATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTCTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTAAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGCTGTTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTCGTGGAACAAGGCGATTTAGAAGCCAAGC
AACGTTTGGCGGAAGCTAATTTGCGGTTGGTCGTTTCCATCGCTAAGCGCTATGTTGGGCGTGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGAAATATGGGATTGATGAAAGCTGTTGATAAGTTTGACTATACTAAAGGTTTCAAATTTTCAACATA
TGCTACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCCGATCAAGCTCGTACAATTCGAATTCCGGTTCATATGG
TCGAAACAATCAATAAATTAGTACGGGAACAACGCAATCTTTTGCAGGAATTGGGGCAAGATCCAACGCCAGAGCAAATT
GCAGAGCGGATGGACATGACGCCTGATAAAGTCCGTGAAATTTTGAAGATTGCACAAGAACCTGTTTCTCTTGAAACACC
AATTGGAGAGGAAGATGATAGTCATTTGGGTGATTTCATTGAGGATGAGGTTATTGAAAATCCAGTTGATTATACAACGC
GTATCGTTTTGCGTGAGCAATTAGATGAAGTTCTTGATACATTAACAGACCGTGAAGAAAATGTGCTGCGTCTGCGTTTT
GGGCTAGATGATGGGAAAATGCGTACACTGGAAGATGTTGGAAAAGTATTTAACGTAACTCGTGAACGGATTCGACAAAT
TGAGGCTAAAGCCCTGCGCAAATTGCGTCATCCAAGTCGTAGCAAACCGCTTCGTGACTTTATTGAGGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

3D structure

• AlphaFold DB: A0A380L3U2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37