Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6J13_RS00895 Genome accession   NZ_CP068213
Coordinates   192446..194215 (+) Length   589 a.a.
NCBI ID   WP_006269913.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1156     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 187446..199215
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J13_RS00870 (I6J13_00870) - 187921..188151 (+) 231 WP_080572555.1 DUF1146 family protein -
  I6J13_RS00875 (I6J13_00875) murA 188189..189469 (+) 1281 WP_006269932.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  I6J13_RS00880 (I6J13_00880) - 189462..189638 (+) 177 WP_003072163.1 DNA-directed RNA polymerase subunit beta -
  I6J13_RS00885 (I6J13_00885) endA 189701..190546 (+) 846 WP_003072166.1 DNA/RNA non-specific endonuclease Machinery gene
  I6J13_RS00890 (I6J13_00890) - 190700..192436 (+) 1737 WP_006269922.1 ABC transporter ATP-binding protein -
  I6J13_RS00895 (I6J13_00895) rcrQ 192446..194215 (+) 1770 WP_006269913.1 ABC transporter ATP-binding protein Regulator
  I6J13_RS00900 (I6J13_00900) - 194588..195589 (-) 1002 WP_006269915.1 YdcF family protein -
  I6J13_RS00915 (I6J13_00915) - 196316..196696 (+) 381 WP_003069732.1 CidA/LrgA family protein -
  I6J13_RS00920 (I6J13_00920) - 196689..197384 (+) 696 WP_003040138.1 LrgB family protein -
  I6J13_RS00925 (I6J13_00925) - 197445..198377 (-) 933 WP_006270177.1 IS30 family transposase -
  I6J13_RS00930 (I6J13_00930) - 198569..199081 (+) 513 WP_006267445.1 adenine phosphoribosyltransferase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 66014.10 Da        Isoelectric Point: 5.3529

>NTDB_id=459092 I6J13_RS00895 WP_006269913.1 192446..194215(+) (rcrQ) [Streptococcus constellatus strain FDAARGOS_1156]
MKQHSFMRLWSYLKVYKLSVILAIFLKVVSIVMSVLEPFVLGLAITELTRNVLDIAKGVEGASINTTYVFGVMALYLLRG
LFYEIGAYYSNYFMTNAVQNTVRDMRNELSSKINQIPVSYFDKHQFGDLLGRFTSDVETVSNALQQSFLQVVNAVLTITL
VIGMVLYLNFQLALIVIASIPLTYFGATFILKKSQPYFKKQADTLGVMNGFVQENLTGFNVLKLYGREETSSDDFREITQ
NLQEVGFKASFISGLMMPILNAISDLTYLLVAVVGGLQVISGQLTIGNMQAFVQYVWQVNQPIQNLTQLAGQLQSAKSSL
DRIFQVLDEPDEVTDIKEQLEHDLTGQVSFQHVDFQYVESKPLIHDFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYDV
TAGSISVDGHDIRNLSRQDYRKQFGMVLQDAWLYEGTVKDNLRFGNLSATDEEIVDAAKAANVDHFIRTLPGGYNMEMNQ
ESSNISLGQKQLLTIARALLANPKILILDEATSSVDTRLELLIQKAMKNLMQGRTSFVIAHRLSTIQEADKILVLKDGQI
IEQGTHESLLADRGFYYDLYTSQFAKKEA

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=459092 I6J13_RS00895 WP_006269913.1 192446..194215(+) (rcrQ) [Streptococcus constellatus strain FDAARGOS_1156]
ATGAAACAACATAGTTTTATGCGTTTGTGGAGTTACTTAAAAGTTTATAAACTCTCAGTAATCCTTGCTATCTTTTTGAA
GGTGGTGAGTATTGTGATGAGCGTGCTGGAACCTTTTGTACTTGGTCTTGCTATTACAGAATTGACACGAAATGTGCTGG
ACATAGCAAAAGGAGTCGAAGGCGCCAGTATAAACACAACATATGTCTTTGGGGTAATGGCACTTTACCTTTTGCGTGGT
TTGTTCTATGAAATTGGGGCTTACTATTCTAATTATTTTATGACCAATGCAGTGCAAAATACAGTACGTGACATGCGCAA
TGAGTTGAGTTCTAAAATTAATCAAATTCCAGTTTCTTACTTTGATAAGCATCAATTTGGAGATTTGCTAGGACGCTTTA
CCAGTGATGTAGAGACTGTTTCAAATGCGCTTCAACAATCATTCTTACAAGTTGTAAATGCGGTTTTGACCATTACTTTA
GTTATCGGAATGGTCTTGTATCTTAATTTTCAACTGGCTTTGATAGTGATTGCTAGCATTCCATTGACCTATTTTGGGGC
GACCTTTATTTTGAAAAAATCACAACCATATTTTAAAAAGCAAGCAGATACGCTAGGTGTCATGAATGGATTTGTTCAAG
AAAATCTAACTGGTTTTAATGTGCTGAAACTCTATGGTCGTGAAGAAACATCTTCAGACGATTTTCGAGAAATCACGCAA
AACCTCCAAGAAGTCGGGTTCAAAGCTAGTTTTATTTCTGGCTTGATGATGCCAATTTTGAACGCAATTTCAGATTTGAC
TTATCTGCTTGTAGCAGTTGTTGGTGGTTTGCAAGTCATTTCTGGACAATTAACAATTGGGAACATGCAAGCTTTTGTAC
AATATGTATGGCAAGTAAACCAACCAATTCAAAATTTAACGCAGTTAGCTGGGCAATTACAAAGTGCTAAGTCTTCGCTG
GATCGTATTTTCCAAGTCTTAGATGAACCAGACGAAGTAACGGATATAAAAGAGCAATTAGAACATGATTTGACAGGACA
GGTTAGTTTTCAACATGTTGATTTTCAATATGTTGAAAGCAAACCGCTCATTCACGACTTCAATTTGGAGGTAAAGCCGG
GTGAAATGGTAGCAATTGTCGGTCCGACCGGTGCTGGAAAGACCACCCTCATCAATCTACTCATGCGCTTTTACGATGTA
ACAGCAGGTTCAATTTCTGTTGATGGTCACGATATTCGTAACTTATCGCGCCAAGATTACCGCAAGCAATTTGGCATGGT
CTTGCAAGACGCTTGGCTCTATGAAGGAACAGTAAAGGATAACTTGCGTTTTGGAAATCTGAGTGCAACAGATGAGGAAA
TTGTGGACGCTGCCAAAGCTGCTAATGTAGATCATTTCATTCGGACACTTCCGGGTGGCTATAATATGGAAATGAATCAA
GAGTCTAGCAATATCTCACTGGGGCAAAAACAATTATTGACCATTGCGCGCGCACTATTGGCAAATCCCAAAATCTTAAT
TTTGGATGAAGCAACCTCGTCGGTTGATACGCGCCTAGAGCTCTTGATTCAAAAAGCGATGAAGAACCTCATGCAAGGAC
GGACAAGCTTTGTCATTGCTCACCGCTTATCGACAATTCAAGAAGCTGATAAAATTTTAGTCCTTAAAGACGGACAAATT
ATTGAACAAGGAACTCATGAATCACTTCTAGCTGATAGAGGCTTCTATTATGATTTATATACGAGCCAATTTGCTAAGAA
AGAAGCTTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(20-302)

ABC transporter (ABC_tran)

(365-513)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.444

100

0.448