Detailed information NTG0458798

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: I6J12_RS04095
• Genome accession: NZ_CP068060
• Coordinates: 862561..863673 (+)
• Length: 370 a.a.
• NCBI ID: WP_003034483.1
• Uniprot ID: I0SIW6
• Organism: Streptococcus anginosus strain FDAARGOS_1155
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 857561..868673

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J12_RS04075 (I6J12_04075)	-	859294..859632 (+)	339	WP_003024641.1	ATP cone domain-containing protein	-
I6J12_RS04080 (I6J12_04080)	rpsU	859830..860006 (+)	177	WP_000048054.1	30S ribosomal protein S21	-
I6J12_RS04085 (I6J12_04085)	mscL	860247..860627 (-)	381	WP_003031453.1	large conductance mechanosensitive channel protein MscL	-
I6J12_RS04090 (I6J12_04090)	dnaG	860783..862558 (+)	1776	WP_003034548.1	DNA primase	-
I6J12_RS04095 (I6J12_04095)	rpoS	862561..863673 (+)	1113	WP_003034483.1	RNA polymerase sigma factor RpoD	Regulator
I6J12_RS04100 (I6J12_04100)	-	863692..864021 (+)	330	WP_003024629.1	metal-sulfur cluster assembly factor	-
I6J12_RS04105 (I6J12_04105)	brnQ	864176..865504 (+)	1329	WP_003034439.1	branched-chain amino acid transport system II carrier protein	-
I6J12_RS04110 (I6J12_04110)	ccdA2	865789..866499 (+)	711	WP_003024626.1	thiol-disulfide oxidoreductase-associated membrane protein CcdA2	-
I6J12_RS04115 (I6J12_04115)	-	866663..867076 (+)	414	Protein_821	redoxin domain-containing protein	-
I6J12_RS04120 (I6J12_04120)	msrB	867089..868207 (+)	1119	WP_042752880.1	peptide-methionine (R)-S-oxide reductase MsrB	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42466.12 Da
• Isoelectric Point: 4.4643

>NTDB_id=458798 I6J12_RS04095 WP_003034483.1 862561..863673(+) (rpoS) [Streptococcus anginosus strain FDAARGOS_1155]
MATKQKEVTTFDVQVAEFIRNHKKTGTATDDEINDRLVIPFTLEADGIEDLLQRIQDAGIAITDKEGNPSERVLNTEEEE
AELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQELAVLVEQGDLEAKQRLAEANLRLVVSIAKRYVGRGMQFLD
LIQEGNMGLMKAVDKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQLDEVLDTLTDREENVLRLRF
GLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPNRSKPLRDFIED

Nucleotide

• Length: 1113 bp

>NTDB_id=458798 I6J12_RS04095 WP_003034483.1 862561..863673(+) (rpoS) [Streptococcus anginosus strain FDAARGOS_1155]
ATGGCTACAAAACAAAAAGAAGTAACAACTTTTGATGTTCAAGTTGCAGAATTTATTCGCAACCATAAAAAAACTGGTAC
AGCAACCGATGATGAAATCAATGATCGGCTAGTCATTCCATTTACTTTGGAAGCTGATGGCATTGAAGATCTTCTTCAAC
GGATTCAGGACGCAGGGATTGCTATTACGGATAAAGAGGGCAACCCAAGTGAACGGGTTTTAAATACAGAGGAAGAAGAA
GCTGAATTAACAGATGAGGAGTTGCTTGGTAGCAATTCTGCTAAAGTGAACGACCCTGTCCGTATGTATTTAAAGGAAAT
TGGTGTTGTTCCGTTATTGACCAATGAAGAAGAGCAAGAATTAGCTGTTCTTGTGGAGCAAGGCGACTTAGAAGCGAAAC
AACGTTTGGCAGAAGCGAATTTGCGGTTGGTTGTCTCTATTGCTAAGCGCTATGTTGGACGCGGCATGCAGTTTCTTGAC
TTGATTCAAGAAGGCAATATGGGATTGATGAAAGCCGTTGACAAGTTTGACTATACCAAAGGTTTCAAATTTTCGACCTA
TGCAACTTGGTGGATTCGTCAAGCGATTACTCGTGCGATTGCTGACCAAGCGCGTACGATTCGGATTCCGGTTCACATGG
TTGAGACAATCAATAAATTAGTGCGGGAGCAACGAAATCTTTTGCAAGAATTGGGACAAGATCCAACGCCAGAACAAATT
GCTGAGCGCATGGATATGACACCAGATAAAGTTCGTGAAATTTTGAAGATTGCCCAAGAGCCGGTCTCTCTTGAAACTCC
AATTGGAGAAGAAGATGATAGTCATCTTGGCGATTTCATTGAGGATGAAGTGATTGAAAATCCAGTTGATTACACAACAC
GTATTGTCCTACGTGAGCAATTAGACGAGGTTCTTGATACATTAACAGACCGTGAAGAAAATGTCCTACGTTTGCGTTTC
GGTCTAGATGATGGTAAAATGCGTACGCTGGAAGATGTTGGAAAAGTCTTTAACGTGACTCGTGAACGGATTCGACAAAT
TGAGGCCAAAGCCCTACGCAAATTGCGTCATCCAAATCGTAGCAAGCCACTTCGTGACTTTATTGAAGATTAG

Domains

Predicted by InterProScan.

• Sigma-70 region 3 (Sigma70_r3) (215-291)

• Sigma-70, region 4 (Sigma70_r4) (304-357)

• Sigma-70 factor, region 1.1 (Sigma70_r1_1) (14-87)

• Sigma-70 region 2 (Sigma70_r2) (136-205)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (98-130)

3D structure

• AlphaFold DB: I0SIW6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	46.918	78.919	0.37