Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   I6J12_RS01270 Genome accession   NZ_CP068060
Coordinates   255099..255809 (-) Length   236 a.a.
NCBI ID   WP_025271928.1    Uniprot ID   -
Organism   Streptococcus anginosus strain FDAARGOS_1155     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 250099..260809
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J12_RS01255 (I6J12_01255) - 250486..251610 (+) 1125 WP_003033878.1 AI-2E family transporter -
  I6J12_RS01260 (I6J12_01260) - 251834..253483 (+) 1650 WP_003033914.1 phosphoenolpyruvate carboxykinase (ATP) -
  I6J12_RS01265 (I6J12_01265) - 253600..254940 (+) 1341 WP_003033925.1 hemolysin family protein -
  I6J12_RS01270 (I6J12_01270) treR 255099..255809 (-) 711 WP_025271928.1 trehalose operon repressor Regulator
  I6J12_RS01275 (I6J12_01275) treP 255989..258001 (+) 2013 WP_003033943.1 PTS system trehalose-specific EIIBC component -
  I6J12_RS01280 (I6J12_01280) treC 258207..259838 (+) 1632 WP_003033969.1 alpha,alpha-phosphotrehalase -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27612.64 Da        Isoelectric Point: 9.2637

>NTDB_id=458770 I6J12_RS01270 WP_025271928.1 255099..255809(-) (treR) [Streptococcus anginosus strain FDAARGOS_1155]
MKKYEQIFKLLEQDILNEKYQMNDYLPSEHELVQAYKVSRDTIRKSLDLLQKAGLIQKMRGQGSKVIQQEQIDFPVSNLT
SYQELVRQHGMNSKTNVIQLEKITVDKKLSSLTGFPEYRLVWRIIRQRVVDGIASVLDIDYLDKSFVPSISREIAEHSIY
AYLEDELGLHISYAQKEITIDPATNRDKILMNIGNDHHVVSVKSKVYLADGQQFQFTDSRHKLEKFRFVDFSKRQK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=458770 I6J12_RS01270 WP_025271928.1 255099..255809(-) (treR) [Streptococcus anginosus strain FDAARGOS_1155]
ATGAAAAAATATGAACAAATTTTTAAACTCTTAGAACAAGATATTCTAAACGAGAAATATCAGATGAATGATTATCTTCC
TAGCGAACACGAACTTGTCCAGGCCTACAAGGTCAGCCGTGACACGATTCGTAAATCGCTTGATTTGCTTCAAAAAGCTG
GTCTCATTCAAAAAATGAGAGGTCAAGGCTCTAAAGTCATCCAACAAGAACAGATTGACTTTCCCGTTTCCAACCTAACT
AGTTACCAAGAACTTGTCCGGCAACATGGAATGAATTCTAAAACCAATGTCATACAGTTAGAAAAAATTACAGTTGATAA
AAAATTATCCAGTCTTACTGGTTTTCCTGAATACCGTCTGGTGTGGCGGATTATTCGCCAAAGGGTCGTTGACGGGATTG
CCTCCGTCTTGGATATTGATTACCTTGATAAGAGTTTTGTCCCTTCTATTAGCCGTGAAATTGCAGAGCATTCAATTTAT
GCTTATTTAGAAGATGAACTGGGACTACACATTTCTTACGCCCAAAAAGAAATCACAATTGATCCAGCCACTAATCGCGA
TAAAATATTGATGAACATTGGAAATGACCACCATGTCGTCTCTGTCAAATCAAAAGTCTATCTTGCAGACGGACAGCAAT
TTCAGTTTACAGATAGTCGTCATAAACTCGAAAAATTCCGTTTCGTTGACTTCTCCAAACGGCAAAAATGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

64.407

100

0.644