Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   I6J14_RS10470 Genome accession   NZ_CP068057
Coordinates   2094831..2095109 (+) Length   92 a.a.
NCBI ID   WP_115253067.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2089831..2100109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS10435 (I6J14_10435) comFA/cflA 2090169..2091494 (+) 1326 WP_003052142.1 DEAD/DEAH box helicase Machinery gene
  I6J14_RS11130 (I6J14_10440) comFC/cflB 2091466..2092131 (+) 666 WP_115253069.1 ComF family protein Machinery gene
  I6J14_RS10445 (I6J14_10445) raiA 2092211..2092759 (+) 549 WP_003052138.1 ribosome-associated translation inhibitor RaiA -
  I6J14_RS10450 (I6J14_10450) - 2092714..2093651 (-) 938 Protein_2022 IS30 family transposase -
  I6J14_RS10455 (I6J14_10455) - 2093861..2094208 (+) 348 WP_003052134.1 hypothetical protein -
  I6J14_RS10460 (I6J14_10460) - 2094213..2094401 (+) 189 WP_003052131.1 helix-turn-helix transcriptional regulator -
  I6J14_RS10465 (I6J14_10465) - 2094414..2094809 (+) 396 WP_115253068.1 ATP-binding cassette domain-containing protein -
  I6J14_RS10470 (I6J14_10470) pptA 2094831..2095109 (+) 279 WP_115253067.1 hypothetical protein Regulator
  I6J14_RS10475 (I6J14_10475) - 2095120..2095470 (+) 351 WP_115253066.1 hypothetical protein -
  I6J14_RS10485 (I6J14_10485) - 2097541..2098158 (-) 618 WP_115253064.1 ATP-binding cassette domain-containing protein -
  I6J14_RS10490 (I6J14_10490) - 2098142..2098945 (-) 804 WP_115253063.1 ABC transporter ATP-binding protein -
  I6J14_RS10495 (I6J14_10495) - 2098957..2099778 (-) 822 WP_037584999.1 ABC transporter permease -

Sequence

Protein


Download         Length: 92 a.a.        Molecular weight: 10558.19 Da        Isoelectric Point: 4.5388

>NTDB_id=458740 I6J14_RS10470 WP_115253067.1 2094831..2095109(+) (pptA) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MNNPKFLILDEPFNGIDPEGVVDLRNSILRLNQAEGLTIIISSHILSDLYKICNRFLFLNKQTIIADIFKDELKNNISST
ESIEDFYLSIIK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=458740 I6J14_RS10470 WP_115253067.1 2094831..2095109(+) (pptA) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGAATAACCCAAAATTTTTAATTCTTGATGAACCTTTTAATGGCATTGATCCTGAAGGTGTTGTTGATTTAAGAAATTC
GATACTAAGGTTGAATCAAGCTGAGGGATTAACAATTATCATCAGTAGTCATATTCTTTCAGACTTATATAAAATCTGTA
ATCGATTTTTGTTTCTAAATAAACAGACAATAATTGCTGATATTTTTAAGGATGAATTAAAAAATAATATCAGCTCAACT
GAATCAATTGAAGATTTCTATCTTTCAATAATTAAGTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

37.363

98.913

0.37