Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6J14_RS03525 Genome accession   NZ_CP068057
Coordinates   727752..729524 (-) Length   590 a.a.
NCBI ID   WP_003050294.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 722752..734524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS03510 (I6J14_03510) - 723400..725424 (+) 2025 WP_115252811.1 bifunctional metallophosphatase/5'-nucleotidase -
  I6J14_RS03515 (I6J14_03515) - 725612..726022 (-) 411 WP_003050301.1 peptide deformylase -
  I6J14_RS03520 (I6J14_03520) gdhA 726147..727496 (-) 1350 WP_003050296.1 NADP-specific glutamate dehydrogenase -
  I6J14_RS03525 (I6J14_03525) rcrQ 727752..729524 (-) 1773 WP_003050294.1 ABC transporter ATP-binding protein Regulator
  I6J14_RS03530 (I6J14_03530) rcrP 729524..731269 (-) 1746 WP_115252810.1 ABC transporter ATP-binding protein Regulator
  I6J14_RS03535 (I6J14_03535) - 731377..733254 (-) 1878 WP_115252809.1 ABC-F family ATP-binding cassette domain-containing protein -
  I6J14_RS03540 (I6J14_03540) - 733251..734459 (-) 1209 WP_003050286.1 CCA tRNA nucleotidyltransferase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65894.33 Da        Isoelectric Point: 5.6145

>NTDB_id=458663 I6J14_RS03525 WP_003050294.1 727752..729524(-) (rcrQ) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MAEQHVFKRVWTYLSAYRGLIFLAVFLKIISAVMSVLEPFVLGLVITELSSNLLDMAKGIEGAGINTSYIAFLLLVYFIR
ALCYEIGAYGSNYVMTKAVQSTIRDLRQALSQKINRIPVSYFDQHQFGDMLGRFTSDVETVSNALQQSFLQIVNAFLTIF
LVMGMVLYLNLTLALIVIVAIPIIYAASQFILKKSQPYFKEQAKVLGEMNGFVQENLSGFNVLKLYGREEASEQAFHQIT
EHLQDVGFKASFLSGIMMPVLHFISDSVYMIVALVAGLQVMAGQLTIGNMQAFVQYIWQISQPIQTITQLAGLLQSAKSS
LERIFAVLDEADDAMLVTDQLDEDLTGQVSFNHVDFSYQADKPLIKEFTLDVNPGEMIAIVGPTGAGKTTLINLLMRFYD
VNKGSITVDGHDIRDLSRQSYRRQFGMVLQDAWLYEGTIQDNLRFGNLEASDEAIVEAAKAANVDHFIRTLPGGYHMVMN
QESSNISLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMKRLMKGRTSFVIAHRLSTIQEADKILVLKDGQ
IIEQGNHDSLLAAQGFYFDLYHSQFKSSQP

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=458663 I6J14_RS03525 WP_003050294.1 727752..729524(-) (rcrQ) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGGCAGAGCAACATGTTTTTAAGCGGGTGTGGACCTATTTAAGCGCCTACCGTGGCTTAATCTTTTTAGCAGTTTTCCT
TAAAATTATCAGTGCTGTCATGAGTGTCTTGGAACCCTTTGTGCTTGGTTTAGTCATTACAGAATTGTCATCTAATCTTC
TTGATATGGCTAAGGGGATTGAAGGCGCAGGGATTAATACCTCTTATATTGCTTTTTTACTGCTTGTCTATTTTATTCGT
GCATTATGTTATGAAATCGGAGCCTACGGGTCAAATTATGTCATGACCAAGGCTGTTCAATCGACTATTCGTGATTTGAG
ACAGGCCTTGAGTCAAAAAATTAATCGTATTCCTGTCTCTTATTTTGACCAACACCAGTTTGGGGATATGCTAGGACGCT
TCACCTCAGATGTTGAGACAGTGTCAAATGCTTTGCAACAGTCTTTCTTGCAGATTGTCAATGCCTTTCTCACCATTTTT
CTCGTGATGGGAATGGTCTTGTACCTCAATCTGACACTAGCTTTGATTGTGATTGTTGCTATTCCTATTATCTATGCTGC
ATCTCAATTCATTTTAAAAAAATCACAACCTTATTTTAAAGAGCAAGCTAAGGTGTTAGGAGAGATGAATGGTTTTGTTC
AGGAAAATCTATCGGGTTTTAACGTCTTAAAACTTTACGGCCGCGAAGAAGCCTCAGAGCAAGCCTTCCATCAGATTACT
GAACACTTGCAAGATGTTGGGTTTAAGGCAAGCTTTTTATCCGGTATTATGATGCCTGTTTTGCATTTTATTTCTGATTC
TGTCTATATGATCGTTGCTTTGGTCGCAGGCCTGCAAGTTATGGCAGGACAATTGACCATTGGGAATATGCAAGCTTTTG
TTCAATATATTTGGCAAATCAGTCAGCCAATTCAAACCATTACCCAGTTAGCAGGTTTATTACAGAGTGCTAAATCATCC
TTAGAACGTATTTTTGCGGTTCTGGATGAGGCGGATGATGCCATGCTTGTGACAGATCAACTGGATGAGGATTTAACAGG
TCAAGTCTCATTTAACCATGTGGATTTTTCCTATCAGGCTGATAAACCTTTGATCAAAGAGTTTACACTTGATGTTAACC
CCGGTGAGATGATTGCGATTGTAGGACCAACTGGAGCTGGGAAAACGACTCTCATTAACCTCTTGATGCGTTTTTATGAT
GTGAATAAAGGATCCATTACTGTTGATGGGCATGATATTCGTGACCTGTCACGTCAATCCTATCGTCGCCAATTTGGTAT
GGTCCTACAAGATGCTTGGCTTTATGAAGGGACAATCCAAGATAACCTTCGCTTTGGGAACCTTGAAGCCAGCGATGAGG
CTATTGTAGAAGCAGCCAAAGCTGCCAATGTGGATCATTTTATCAGAACCTTGCCAGGTGGGTACCACATGGTGATGAAC
CAAGAATCTAGTAATATTTCCTTAGGTCAAAAACAACTTTTAACCATTGCAAGGGCCTTGTTGGCTGATCCTAAAATTCT
GATTTTAGATGAAGCGACCTCTTCGGTAGATACTCGGCTAGAATTATTGATTCAAAAGGCGATGAAGCGGTTAATGAAAG
GACGAACAAGCTTTGTGATCGCTCACCGTCTGTCTACAATTCAAGAAGCTGATAAGATTCTAGTATTAAAAGATGGTCAG
ATCATTGAACAAGGGAACCATGACAGTTTACTGGCTGCTCAAGGTTTCTATTTTGATCTCTATCATAGTCAATTTAAATC
CAGTCAACCCTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(366-514)

ABC transporter transmembrane region (ABC_membrane)

(21-303)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

43.463

99.831

0.434