Detailed information    

insolico Bioinformatically predicted

Overview


Name   xerS   Type   Machinery gene
Locus tag   I6J14_RS02710 Genome accession   NZ_CP068057
Coordinates   560037..561107 (-) Length   356 a.a.
NCBI ID   WP_115245959.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain FDAARGOS_1157     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 555037..566107
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J14_RS02685 (I6J14_02685) - 555789..556787 (+) 999 WP_003050642.1 polyprenyl synthetase family protein -
  I6J14_RS02690 (I6J14_02690) - 556878..557384 (+) 507 WP_115252872.1 FMN-binding protein -
  I6J14_RS02695 (I6J14_02695) - 557455..558507 (+) 1053 WP_003050637.1 FAD:protein FMN transferase -
  I6J14_RS02700 (I6J14_02700) - 558497..559447 (+) 951 WP_003050631.1 1,4-dihydroxy-2-naphthoate polyprenyltransferase -
  I6J14_RS02705 (I6J14_02705) - 559519..559959 (-) 441 WP_037584945.1 NusG domain II-containing protein -
  I6J14_RS02710 (I6J14_02710) xerS 560037..561107 (-) 1071 WP_115245959.1 tyrosine recombinase XerS Machinery gene
  I6J14_RS02715 (I6J14_02715) - 561748..562992 (+) 1245 WP_115252871.1 peptidoglycan bridge formation glycyltransferase FemA/FemB family protein -
  I6J14_RS02720 (I6J14_02720) - 563022..563444 (-) 423 WP_115252870.1 cupin domain-containing protein -
  I6J14_RS02725 (I6J14_02725) - 563575..564642 (-) 1068 WP_003050614.1 HAMP domain-containing sensor histidine kinase -
  I6J14_RS02730 (I6J14_02730) - 564626..565318 (-) 693 WP_003050611.1 response regulator transcription factor -
  I6J14_RS02735 (I6J14_02735) - 565397..566080 (-) 684 WP_115245955.1 ABC transporter ATP-binding protein -

Sequence


Protein


Download         Length: 356 a.a.        Molecular weight: 41384.63 Da        Isoelectric Point: 9.6221

>NTDB_id=458658 I6J14_RS02710 WP_115245959.1 560037..561107(-) (xerS) [Streptococcus dysgalactiae strain FDAARGOS_1157]
MRRDLLLEKIETYKAIMPWYVLEYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTDATVIADIDLATLEHLTKKDLE
AFVLYLRERPSLNTYSTKQGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETMGFLEYVDKDYELKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMVIEVIRKGGKRDS
VNVAGFAKPYLEAYLAIRKNRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSQDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide


Download         Length: 1071 bp        

>NTDB_id=458658 I6J14_RS02710 WP_115245959.1 560037..561107(-) (xerS) [Streptococcus dysgalactiae strain FDAARGOS_1157]
ATGAGACGTGATTTGTTACTCGAAAAAATTGAAACTTATAAAGCTATCATGCCTTGGTATGTGTTAGAATACTATCAGTC
AAAATTGGCTGTCCCATACAGTTTTACAACCCTATATGAGTATTTAAAAGAATACAAACGTTTTTTTGACTGGTTAATGG
ATGCTGACTTAACGGATGCGACTGTCATTGCTGATATCGATTTAGCGACTCTTGAACACTTGACTAAGAAAGATTTAGAG
GCCTTTGTTCTGTACCTAAGAGAACGCCCTTCTCTTAATACTTATTCCACCAAACAGGGTCTTTCTCAAACAACGATTAA
TCGCACCTTGTCTGCTTTATCAAGTCTTTATAAATATTTGACTGAAGAGGTTGAAAATGATCAGGGAGAGCCTTATTTCT
ATCGGAATGTCATGAAGAAGGTGTCCACGAAGAAGAAAAAAGAAACCCTAGCTTCTAGAGCTGAAAACATTAAACAAAAG
CTTTTTTTAGGAGATGAAACCATGGGTTTTCTAGAGTATGTAGATAAGGATTATGAACTCAAATTATCCAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAAGAGAGAGATCTAGCAATTATTGCCCTACTACTGGCCTCAGGCGTTCGTCTATCAGAAG
CCGTTAATCTTGATTTAAAAGATGTTAATCTTAATATGATGGTTATCGAGGTTATCCGCAAAGGGGGAAAACGAGATTCA
GTGAATGTTGCAGGTTTTGCTAAACCTTATTTAGAAGCTTATCTGGCTATTCGCAAGAATCGTTATAAGGCTGAAAAACA
AGACCTTGCCTTCTTTTTAACGGAATATCGAGGGGTCCCTAATCGCATGGATGCCTCCAGTATTGAAAAAATGGTTGGTA
AATACTCTCAAGATTTTAAAATTCGTGTGACTCCCCATAAGTTACGACACACATTAGCCACACGTCTTTATGATGCGACC
AAGTCCCAGGTTTTGGTCAGTCATCAATTGGGGCATGCATCGACTCAAGTTACCGATTTGTATACACATATTGTTAACGA
TGAACAAAAAAACGCCTTAGACAAATTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  xerS Streptococcus pneumoniae R6

80.899

100

0.809