Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV346_RS07715 Genome accession   NZ_CP056199
Coordinates   1655569..1656195 (+) Length   208 a.a.
NCBI ID   WP_181623718.1    Uniprot ID   A0A7L6CRI4
Organism   Enterobacter sp. RHBSTW-00994     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1650569..1661195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV346_RS07695 (HV346_07700) - 1650968..1652728 (-) 1761 WP_181622936.1 Lon protease family protein -
  HV346_RS07700 (HV346_07705) matP 1652915..1653367 (+) 453 WP_181622937.1 macrodomain Ter protein MatP -
  HV346_RS07705 (HV346_07710) ompA 1653432..1654487 (-) 1056 WP_181622938.1 porin OmpA -
  HV346_RS07710 (HV346_07715) sulA 1654842..1655351 (-) 510 WP_181622939.1 SOS-induced cell division inhibitor SulA -
  HV346_RS07715 (HV346_07720) sxy/tfoX 1655569..1656195 (+) 627 WP_181623718.1 TfoX/Sxy family DNA transformation protein Regulator
  HV346_RS07720 (HV346_07725) yccS 1656152..1658314 (-) 2163 WP_181622940.1 YccS family putative transporter -
  HV346_RS07725 (HV346_07730) - 1658333..1658779 (-) 447 WP_181622941.1 YccF domain-containing protein -
  HV346_RS07730 (HV346_07735) helD 1658903..1660957 (+) 2055 WP_181622942.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24153.64 Da        Isoelectric Point: 9.6442

>NTDB_id=458643 HV346_RS07715 WP_181623718.1 1655569..1656195(+) (sxy/tfoX) [Enterobacter sp. RHBSTW-00994]
MKKISYERIYKSQEYLSSLGDIQHRALFGGYTLAVDDAVFAMVSEGELYLRACEQSTRYCVKHSSSFLTLLKRGRPVLLN
YYRVDEGLWQDRERLLQLSSFALESARKERHQRHQRNRLKDLPNLTFQIEVLLYEAGITNEETLRGLGAKTSWLKIRKNN
KQLGIKVLFALEGAIEGLHEAALPTPIRRELTEWFNALTEPRENHSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=458643 HV346_RS07715 WP_181623718.1 1655569..1656195(+) (sxy/tfoX) [Enterobacter sp. RHBSTW-00994]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCACAGGAATATCTCTCCTCGTTAGGCGATATCCAGCATCGTGCACT
TTTTGGCGGTTATACCCTTGCGGTTGACGATGCCGTATTTGCCATGGTTTCCGAGGGTGAGCTCTATCTTCGCGCCTGTG
AGCAAAGCACCAGGTACTGTGTAAAGCACTCTTCTTCTTTTCTGACTTTATTGAAACGGGGGCGTCCAGTCCTTCTCAAT
TATTACCGGGTGGATGAGGGGCTCTGGCAGGACAGGGAAAGGTTACTTCAGCTCTCTTCCTTTGCACTGGAATCGGCAAG
GAAGGAGCGACATCAGCGACATCAACGAAACCGACTGAAAGATCTTCCGAACCTGACGTTTCAGATCGAAGTACTGCTCT
ATGAAGCGGGTATCACAAATGAAGAAACGCTACGAGGGCTTGGTGCAAAGACAAGCTGGCTGAAAATAAGAAAGAACAAC
AAACAACTGGGTATTAAAGTGCTGTTTGCGCTGGAAGGTGCAATCGAGGGGCTGCATGAAGCGGCGCTCCCGACGCCTAT
TCGCCGGGAGCTAACAGAATGGTTTAATGCGCTGACTGAGCCACGTGAGAACCATTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-105)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7L6CRI4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567