Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   I6J15_RS06925 Genome accession   NZ_CP068056
Coordinates   1373287..1375056 (+) Length   589 a.a.
NCBI ID   WP_020916931.1    Uniprot ID   A0AB33AM83
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1368287..1380056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS06910 (I6J15_06910) - 1368846..1370714 (+) 1869 WP_111712862.1 ABC-F family ATP-binding cassette domain-containing protein -
  I6J15_RS06915 (I6J15_06915) - 1370742..1371437 (+) 696 WP_111712861.1 hypothetical protein -
  I6J15_RS06920 (I6J15_06920) rcrP 1371545..1373284 (+) 1740 WP_020916932.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS06925 (I6J15_06925) rcrQ 1373287..1375056 (+) 1770 WP_020916931.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS06930 (I6J15_06930) queC 1375221..1375874 (+) 654 Protein_1333 7-cyano-7-deazaguanine synthase QueC -
  I6J15_RS06935 (I6J15_06935) queD 1375874..1376320 (+) 447 WP_111712860.1 6-carboxytetrahydropterin synthase QueD -
  I6J15_RS06940 (I6J15_06940) queE 1376313..1377032 (+) 720 Protein_1335 7-carboxy-7-deazaguanine synthase QueE -
  I6J15_RS06945 (I6J15_06945) queF 1377182..1377673 (+) 492 WP_058814005.1 preQ(1) synthase -
  I6J15_RS06950 (I6J15_06950) - 1377710..1378207 (-) 498 WP_111712859.1 HdeD family acid-resistance protein -
  I6J15_RS06955 (I6J15_06955) gdhA 1378444..1379793 (+) 1350 WP_043895060.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65837.03 Da        Isoelectric Point: 5.3654

>NTDB_id=458606 I6J15_RS06925 WP_020916931.1 1373287..1375056(+) (rcrQ) [Streptococcus lutetiensis strain FDAARGOS_1158]
MSKRNVFLRLWDYLRQYKGALFLAVFLKIFSSVMSVLEPFVLGLAITELTSNLMDMAHGVAGAHLNISYIAIILVLYFVR
GMGYGLSSYGSNFFITKAVQKTIHDLRRDLSEKINKIPVSYFDSQQFGNVLGRFTSDVETVSNALQQSFLRIIEAFTTIT
LVICMVLYLNWRLALVVIAIIPITYLSAKFILGKSQPYFKEQADALGDMNGFVQENLSGFNVIKLYGREEISSQEFREIT
QNLQEVGFKASFISGIMMPVLSAISDMAYLIIAVLGALQVLSGQLTVGNMQAFVQYVWQVSQPVQTITQLASVLQSAKSS
LDRIFEVLDEPEEAAQVTEKLVHDLSGQVTFENVSFQYVADKPLIHNFDLEVKPGEMVAIVGPTGAGKTTLINLLMRFYD
VTDGCIKVDGHDIRNLSRQDYRKQFGMVLQDAWLYEASIKENLRFGNLDATDEEIVAAAKAANVDHFIRTLPGGYNMEMN
QESSNVSLGQKQLLTIARALLADPKILILDEATSSVDTRLELLIQKAMEKLMEGRTSFVIAHRLSTIQDADKILVLNNGQ
IVEQGNHESLLAAKGFYYDLYNSQFAKNN

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=458606 I6J15_RS06925 WP_020916931.1 1373287..1375056(+) (rcrQ) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGTCGAAACGAAATGTTTTTCTACGTTTATGGGATTATCTCCGACAATATAAAGGTGCACTTTTCTTGGCTGTTTTTCT
AAAAATCTTTAGCAGTGTTATGAGTGTACTGGAGCCATTTGTACTTGGTCTTGCAATCACTGAATTGACGTCAAATCTTA
TGGATATGGCTCATGGTGTGGCTGGTGCTCATCTTAACATCTCTTATATTGCTATTATTTTGGTGCTTTACTTTGTCCGT
GGTATGGGTTATGGGCTAAGTAGCTATGGTTCAAACTTTTTCATTACCAAAGCGGTGCAAAAGACTATTCATGATTTGCG
TCGTGATTTAAGTGAAAAAATTAATAAGATTCCAGTTTCTTACTTCGACAGTCAGCAATTTGGGAACGTCTTGGGACGTT
TTACATCAGATGTTGAAACAGTGTCAAATGCGCTTCAACAAAGTTTCCTTCGTATCATCGAAGCATTTACGACCATTACA
TTGGTTATTTGCATGGTGCTTTATTTGAATTGGCGTCTTGCTTTGGTCGTCATTGCCATTATTCCGATTACTTACCTTAG
TGCTAAATTCATCTTGGGCAAATCGCAACCTTACTTTAAGGAACAAGCAGACGCACTTGGTGATATGAATGGTTTTGTTC
AAGAAAATCTGTCTGGTTTTAATGTCATTAAACTTTATGGACGTGAAGAAATCTCTAGCCAAGAATTTCGTGAGATTACT
CAGAATTTACAAGAAGTTGGCTTTAAAGCAAGCTTCATTTCTGGAATTATGATGCCAGTTTTAAGTGCTATTTCAGATAT
GGCTTACCTGATTATTGCCGTTTTGGGTGCTCTTCAAGTTCTTTCTGGTCAGCTAACTGTTGGTAATATGCAAGCTTTTG
TTCAATATGTTTGGCAAGTGAGTCAACCAGTTCAAACCATTACCCAATTAGCTAGTGTTCTTCAAAGTGCTAAATCATCA
CTTGACCGTATTTTTGAAGTCTTGGATGAGCCAGAGGAAGCAGCACAAGTGACTGAAAAACTAGTACATGACTTGTCTGG
TCAAGTAACCTTTGAAAATGTATCTTTCCAATATGTTGCTGATAAACCATTGATTCATAACTTTGACTTAGAGGTTAAAC
CGGGTGAAATGGTTGCTATTGTCGGACCAACTGGTGCTGGTAAGACAACGCTGATTAATCTTTTGATGCGATTTTACGAT
GTAACGGATGGTTGCATTAAGGTCGATGGTCACGATATTCGTAATTTGTCACGCCAAGATTATCGCAAACAATTTGGAAT
GGTCTTACAAGATGCTTGGCTTTATGAAGCAAGTATCAAAGAAAACCTTCGTTTTGGTAATTTGGATGCGACAGATGAAG
AAATCGTGGCAGCCGCAAAAGCCGCTAACGTTGATCACTTTATCCGCACCCTTCCAGGTGGTTACAATATGGAAATGAAT
CAAGAATCAAGCAATGTCTCACTTGGTCAAAAACAACTCTTGACCATTGCGCGTGCTTTGCTTGCTGATCCTAAAATCTT
GATCTTGGATGAAGCAACTTCATCCGTTGATACGCGACTTGAACTCTTGATTCAAAAGGCTATGGAGAAATTGATGGAAG
GTCGTACAAGCTTTGTGATTGCACACCGCTTGTCAACTATTCAAGATGCTGATAAAATCTTGGTGCTAAACAATGGTCAG
ATTGTTGAGCAAGGAAACCATGAAAGCCTTCTAGCCGCTAAAGGTTTCTATTACGATTTATACAATAGTCAATTTGCTAA
AAACAATTAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(21-304)

ABC transporter (ABC_tran)

(366-514)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AM83

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

44.388

99.83

0.443