Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6J15_RS06920 Genome accession   NZ_CP068056
Coordinates   1371545..1373284 (+) Length   579 a.a.
NCBI ID   WP_020916932.1    Uniprot ID   A0AB33AMB2
Organism   Streptococcus lutetiensis strain FDAARGOS_1158     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1366545..1378284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J15_RS06900 (I6J15_06900) dapB 1366880..1367647 (+) 768 WP_020916936.1 4-hydroxy-tetrahydrodipicolinate reductase -
  I6J15_RS06905 (I6J15_06905) - 1367644..1368849 (+) 1206 WP_020916935.1 CCA tRNA nucleotidyltransferase -
  I6J15_RS06910 (I6J15_06910) - 1368846..1370714 (+) 1869 WP_111712862.1 ABC-F family ATP-binding cassette domain-containing protein -
  I6J15_RS06915 (I6J15_06915) - 1370742..1371437 (+) 696 WP_111712861.1 hypothetical protein -
  I6J15_RS06920 (I6J15_06920) rcrP 1371545..1373284 (+) 1740 WP_020916932.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS06925 (I6J15_06925) rcrQ 1373287..1375056 (+) 1770 WP_020916931.1 ABC transporter ATP-binding protein Regulator
  I6J15_RS06930 (I6J15_06930) queC 1375221..1375874 (+) 654 Protein_1333 7-cyano-7-deazaguanine synthase QueC -
  I6J15_RS06935 (I6J15_06935) queD 1375874..1376320 (+) 447 WP_111712860.1 6-carboxytetrahydropterin synthase QueD -
  I6J15_RS06940 (I6J15_06940) queE 1376313..1377032 (+) 720 Protein_1335 7-carboxy-7-deazaguanine synthase QueE -
  I6J15_RS06945 (I6J15_06945) queF 1377182..1377673 (+) 492 WP_058814005.1 preQ(1) synthase -
  I6J15_RS06950 (I6J15_06950) - 1377710..1378207 (-) 498 WP_111712859.1 HdeD family acid-resistance protein -

Sequence

Protein


Download         Length: 579 a.a.        Molecular weight: 64987.49 Da        Isoelectric Point: 5.8526

>NTDB_id=458605 I6J15_RS06920 WP_020916932.1 1371545..1373284(+) (rcrP) [Streptococcus lutetiensis strain FDAARGOS_1158]
MKLIWTYLKRYPKWLVLDVIGALTFVVVNLGLPTALARMIDQGVTVGNKNKVYFWALVMLVVIILGMIGRVILAYAAGKI
TTNMIKDMRNDMYDKLQQYSHQEYEQIGVSSLVTRMTSDAFILMQFAEQTLRMGVITPLMMISSVVMILVTSPSLAWIVA
VAIPFLVLVVYYVATRTRPLSEKQQSTLDKINQYVRENLTGLRVIRAFAREDFQEQRFGSKNDEYKDLSSRLFILTGLTE
PLFVLIIISMIVAIVWFALNPLAHGELQIGNLVAFIEYSFHALFSFLLFANFFTMYPRMVVSSERISEVMAMPISIDPND
DGVTETATKGYLEFDKVTFAYPGETESPVLKDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIEENLKYGKSDATSEELQAAADIAQAKEFIESRDDRYQTHLAEGGSNLSGGQKQRLS
IARAVVKKPDIYIFDDSFSALDYKTDAQLRARLKEVTQEATVLIVAQRVGTIMDADQIIVLDKGEIVGRGTHDELMQSND
IYREIANSQLNKAEEMKGE

Nucleotide


Download         Length: 1740 bp        

>NTDB_id=458605 I6J15_RS06920 WP_020916932.1 1371545..1373284(+) (rcrP) [Streptococcus lutetiensis strain FDAARGOS_1158]
ATGAAACTCATTTGGACTTATTTGAAAAGATACCCAAAATGGCTAGTGCTCGATGTTATTGGGGCGCTTACCTTTGTAGT
TGTTAACTTAGGCTTACCAACGGCTCTTGCTCGAATGATTGATCAAGGGGTTACAGTTGGAAATAAGAATAAGGTCTATT
TCTGGGCACTGGTTATGCTGGTTGTCATCATCTTGGGGATGATTGGACGTGTGATTCTTGCTTATGCAGCAGGAAAAATT
ACCACAAACATGATTAAGGATATGCGCAATGACATGTATGATAAGTTACAGCAATATTCACATCAAGAATATGAACAAAT
CGGTGTGTCTTCCTTGGTAACACGGATGACCAGTGATGCTTTTATCTTGATGCAGTTTGCTGAGCAGACGTTACGTATGG
GTGTCATTACACCTTTAATGATGATTTCTAGTGTGGTGATGATTTTAGTAACCAGTCCATCGCTTGCTTGGATTGTAGCA
GTTGCTATTCCATTTTTGGTTCTGGTTGTTTACTATGTGGCAACTCGTACGCGTCCTTTATCAGAAAAACAACAATCAAC
TCTTGATAAAATCAACCAATATGTTCGTGAAAATTTAACTGGTTTACGTGTCATTCGTGCTTTTGCGAGAGAAGATTTTC
AAGAACAGCGTTTTGGTAGCAAAAACGATGAATATAAAGACTTATCAAGCCGCTTATTTATTTTAACTGGTTTGACTGAA
CCACTCTTTGTTCTAATCATTATTTCAATGATTGTTGCTATTGTTTGGTTTGCTTTGAACCCATTGGCACATGGTGAGTT
ACAAATCGGTAACTTGGTAGCCTTTATTGAATATAGTTTCCACGCCTTATTCTCATTTCTTTTGTTTGCCAATTTCTTTA
CCATGTATCCTCGTATGGTGGTTTCAAGCGAACGTATTTCGGAAGTTATGGCGATGCCAATTTCCATTGACCCTAATGAT
GATGGTGTGACTGAGACAGCTACAAAAGGTTATTTGGAATTTGACAAAGTAACCTTTGCTTACCCAGGTGAAACGGAAAG
CCCAGTCTTAAAAGATATTTCCTTTAAGGCAAAACCTGGTGAAACCATTGCCTTTATCGGGTCTACGGGTTCTGGTAAGT
CATCACTGGTTAACTTGATTCCACGTTTTTATGACGTGACGCTTGGTAAGATTTTGGTTGATGGCGTTGATGTTAGGGAT
TATCAACTGAAAGCACTTCGTCAAAAGATTGGCTTTATTCCGCAAAAAGCTCTGCTATTTACAGGAACCATCGAAGAAAA
CTTGAAGTATGGTAAGTCTGATGCGACAAGTGAGGAATTGCAAGCGGCAGCTGATATCGCACAAGCTAAAGAATTTATCG
AAAGTCGTGATGACCGTTATCAAACTCATCTAGCTGAAGGCGGAAGCAATTTGTCAGGTGGTCAAAAACAACGTCTTTCA
ATTGCGCGTGCTGTGGTTAAAAAACCAGATATCTACATTTTCGATGATTCTTTTTCAGCGCTTGATTATAAGACAGACGC
TCAGCTGCGTGCTCGTTTGAAAGAGGTGACACAAGAAGCAACTGTTTTAATTGTGGCGCAACGTGTGGGAACTATCATGG
ATGCCGATCAAATCATTGTGCTTGATAAAGGTGAAATTGTTGGACGTGGCACACATGATGAATTGATGCAATCAAATGAT
ATTTATCGTGAAATTGCTAACTCACAATTGAACAAAGCTGAAGAAATGAAAGGAGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(27-280)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AB33AMB2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.887

91.364

0.364