Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | CJSA_RS05360 | Genome accession | NC_017279 |
| Coordinates | 1013681..1013983 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni IA3902 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1008681..1018983
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJSA_RS05335 (CJSA_1014) | rpsR | 1009043..1009303 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| CJSA_RS05340 (CJSA_1015) | lon | 1009364..1011739 (-) | 2376 | WP_002868636.1 | endopeptidase La | - |
| CJSA_RS05345 (CJSA_1016) | - | 1011756..1012403 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| CJSA_RS05350 (CJSA_1017) | fliW | 1012564..1012953 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| CJSA_RS05355 (CJSA_1018) | proC | 1012953..1013684 (+) | 732 | WP_002868635.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| CJSA_RS05360 (CJSA_1019) | ctsT | 1013681..1013983 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| CJSA_RS05365 (CJSA_1020) | - | 1013980..1014642 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| CJSA_RS05370 (CJSA_1021) | - | 1014639..1015091 (+) | 453 | WP_002894305.1 | hypothetical protein | - |
| CJSA_RS05375 (CJSA_1022) | hemD | 1015088..1015717 (-) | 630 | WP_002864257.1 | uroporphyrinogen-III synthase | - |
| CJSA_RS05380 (CJSA_1023) | thiE | 1015695..1016327 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| CJSA_RS05385 (CJSA_1024) | thiD | 1016317..1017129 (-) | 813 | WP_002899485.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| CJSA_RS05390 (CJSA_1025) | - | 1017126..1017812 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| CJSA_RS05395 (CJSA_1026) | - | 1017809..1018570 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=45849 CJSA_RS05360 WP_002853046.1 1013681..1013983(+) (ctsT) [Campylobacter jejuni subsp. jejuni IA3902]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=45849 CJSA_RS05360 WP_002853046.1 1013681..1013983(+) (ctsT) [Campylobacter jejuni subsp. jejuni IA3902]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |