Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   C663_RS20160 Genome accession   NC_020244
Coordinates   4051352..4052200 (-) Length   282 a.a.
NCBI ID   WP_015385221.1    Uniprot ID   -
Organism   Bacillus subtilis XF-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4046352..4057200
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS20140 (C663_4021) yyaE 4046863..4048866 (-) 2004 WP_015385219.1 molybdopterin-dependent oxidoreductase -
  C663_RS20145 (C663_4022) yyzM 4048917..4049123 (-) 207 WP_003226838.1 DUF951 family protein -
  C663_RS20150 (C663_4023) - 4049217..4050233 (-) 1017 WP_080030758.1 hypothetical protein -
  C663_RS20155 (C663_4024) yyaC 4050696..4051313 (+) 618 WP_003226834.1 spore protease YyaC -
  C663_RS20160 (C663_4025) spo0J 4051352..4052200 (-) 849 WP_015385221.1 stage 0 sporulation protein Spo0J Regulator
  C663_RS20165 (C663_4026) soj 4052193..4052954 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  C663_RS20170 (C663_4027) yyaB 4053202..4053642 (+) 441 WP_003244005.1 PH domain-containing protein -
  C663_RS20175 (C663_4028) noc 4053693..4054544 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  C663_RS20180 (C663_4029) rsmG 4054666..4055385 (-) 720 WP_015385222.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32240.19 Da        Isoelectric Point: 8.3881

>NTDB_id=45848 C663_RS20160 WP_015385221.1 4051352..4052200(-) (spo0J) [Bacillus subtilis XF-1]
MAKGLGKGINALFNQVDLSEETVEEIKITDLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=45848 C663_RS20160 WP_015385221.1 4051352..4052200(-) (spo0J) [Bacillus subtilis XF-1]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTGGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTACCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATAGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGCTGAAACACT
TAGATCTCACGCAAGAACAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAACAAGCTTGAACCGCTTGTACAAAAAGTGATTGCGGAGCAGCTTAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTAAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCAGTTCTTAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGATCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(24-112)

HTH domain found in ParB protein (HTH_ParB)

(163-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387

Multiple sequence alignment