Detailed information NTG0045832

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: TCCBUS3UF1_RS09310
• Genome accession: NC_017278
• Coordinates: 1871018..1872019 (-)
• Length: 333 a.a.
• NCBI ID: WP_014516257.1
• Uniprot ID: -
• Organism: Thermus sp. CCB_US3_UF1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1866018..1877019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TCCBUS3UF1_RS09285 (TCCBUS3UF1_18630)	hisG	1866919..1867542 (+)	624	WP_014516252.1	ATP phosphoribosyltransferase	-
TCCBUS3UF1_RS09290 (TCCBUS3UF1_18640)	trmH	1867526..1868101 (+)	576	WP_014516253.1	tRNA (guanosine(18)-2'-O)-methyltransferase TrmH	-
TCCBUS3UF1_RS09295 (TCCBUS3UF1_18650)	-	1868091..1869044 (-)	954	WP_014516254.1	branched-chain amino acid transaminase	-
TCCBUS3UF1_RS09300 (TCCBUS3UF1_18660)	-	1869041..1869961 (-)	921	WP_014516255.1	hydrogen peroxide-inducible genes activator	-
TCCBUS3UF1_RS09305 (TCCBUS3UF1_18670)	-	1870070..1870978 (+)	909	WP_014516256.1	manganese catalase family protein	-
TCCBUS3UF1_RS09310 (TCCBUS3UF1_18680)	dprA	1871018..1872019 (-)	1002	WP_014516257.1	DNA-processing protein DprA	Machinery gene
TCCBUS3UF1_RS09315 (TCCBUS3UF1_18690)	era	1872103..1873008 (+)	906	WP_014516258.1	GTPase Era	-
TCCBUS3UF1_RS09320 (TCCBUS3UF1_18700)	-	1873052..1873933 (+)	882	WP_014516259.1	acyltransferase	-
TCCBUS3UF1_RS09325 (TCCBUS3UF1_18710)	-	1873934..1874743 (+)	810	WP_014516260.1	molybdopterin-synthase adenylyltransferase MoeB	-
TCCBUS3UF1_RS09330 (TCCBUS3UF1_18720)	-	1874789..1875922 (-)	1134	WP_014516261.1	citrate synthase/methylcitrate synthase	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 35792.47 Da
• Isoelectric Point: 8.4111

>NTDB_id=45832 TCCBUS3UF1_RS09310 WP_014516257.1 1871018..1872019(-) (dprA) [Thermus sp. CCB_US3_UF1]
MDPLALAFLPGIGPKRLQELLSTEDPLRALGERFPQALAAWPLARQRAEEERNRAKALGVRLLGLWEEDFPPGLKRLPQP
PTHLYLKGTLPEEEKAVALVGTRRASPWALAFTRRLSRGLAEAGVWVVSGLARGVDREAHLGALEGGGRTLGVLGSALDR
IYPPEHRSLAQRMDLLSEFPFGTGPKPEFFPRRNRLIAGLVRAVVVVEAPLASGALITARYALELGKEVLAVPGRPTDEG
SLGANRLIQDGAYPVLAPEDVLSYLGFTPRPREALGLSPEEAALHALLQKGEALPEDLAQALGLPPERVLALLTLLELKG
LAQALPGGRYGAA

Nucleotide

• Length: 1002 bp

>NTDB_id=45832 TCCBUS3UF1_RS09310 WP_014516257.1 1871018..1872019(-) (dprA) [Thermus sp. CCB_US3_UF1]
GTGGATCCCCTGGCCCTGGCCTTTCTGCCCGGGATCGGGCCCAAGCGGCTCCAGGAGCTCCTTTCCACGGAAGACCCCTT
GCGGGCGCTAGGGGAGCGTTTCCCCCAGGCCTTGGCCGCCTGGCCCCTGGCCAGGCAACGGGCCGAGGAGGAGCGAAACC
GGGCCAAGGCCCTGGGCGTGCGCCTCCTTGGCCTTTGGGAGGAGGATTTCCCCCCAGGCCTCAAGCGCCTGCCCCAGCCC
CCCACCCACCTCTACCTGAAAGGCACCCTGCCCGAGGAGGAAAAGGCCGTGGCCCTGGTGGGCACCCGGCGGGCCTCGCC
CTGGGCCTTGGCCTTCACCCGCCGGCTTTCCCGGGGGCTGGCCGAGGCGGGGGTTTGGGTGGTTTCCGGCCTGGCCCGCG
GGGTGGACCGGGAGGCCCACCTGGGGGCCTTGGAGGGGGGTGGGCGGACTCTCGGGGTTTTGGGGAGCGCCCTGGACCGG
ATCTACCCGCCCGAGCACCGCTCCTTGGCGCAAAGGATGGACCTCCTCTCCGAGTTTCCCTTCGGCACCGGGCCCAAACC
CGAGTTCTTCCCCCGGCGCAACCGCCTCATCGCCGGCCTGGTGCGGGCGGTGGTGGTGGTGGAGGCCCCTTTGGCCTCCG
GGGCCCTCATCACCGCCCGCTACGCCCTGGAGTTGGGCAAGGAGGTCTTGGCGGTGCCGGGGCGGCCCACGGACGAGGGG
TCCCTGGGGGCCAACCGCCTGATCCAGGACGGGGCCTACCCCGTGCTGGCCCCGGAGGATGTCCTTTCCTACCTGGGGTT
TACCCCCAGGCCCAGGGAGGCTTTGGGCCTCTCCCCTGAAGAGGCGGCCCTCCACGCCCTCCTGCAGAAGGGGGAGGCCC
TTCCCGAGGACCTGGCCCAAGCCCTGGGCCTTCCCCCGGAGCGGGTGCTGGCCCTGCTGACCCTTTTGGAGCTCAAGGGG
CTGGCCCAAGCCTTGCCCGGGGGGCGGTACGGGGCAGCCTAG

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (56-255)

• DprA winged helix domain (DprA_WH) (269-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Thermus thermophilus HB27	81.627	99.7	0.814
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.165	100	0.444
dprA	Vibrio campbellii strain DS40M4	39.66	100	0.42
dprA	Vibrio cholerae strain A1552	36.288	100	0.393
dprA	Glaesserella parasuis strain SC1401	32.8	100	0.369