Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HV349_RS07460 Genome accession   NZ_CP056126
Coordinates   1558053..1558679 (+) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain RHBSTW-01009     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1553053..1563679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HV349_RS07440 (HV349_07445) - 1553453..1555213 (-) 1761 WP_059346435.1 Lon protease family protein -
  HV349_RS07445 (HV349_07450) matP 1555400..1555852 (+) 453 WP_038417562.1 macrodomain Ter protein MatP -
  HV349_RS07450 (HV349_07455) ompA 1555916..1556971 (-) 1056 WP_115504044.1 porin OmpA -
  HV349_RS07455 (HV349_07460) sulA 1557326..1557835 (-) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  HV349_RS07460 (HV349_07465) sxy/tfoX 1558053..1558679 (+) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  HV349_RS07465 (HV349_07470) yccS 1558636..1560798 (-) 2163 WP_181599726.1 YccS family putative transporter -
  HV349_RS07470 (HV349_07475) - 1560818..1561264 (-) 447 WP_023311032.1 YccF domain-containing protein -
  HV349_RS07475 (HV349_07480) helD 1561388..1563442 (+) 2055 WP_059346437.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=458308 HV349_RS07460 WP_023311030.1 1558053..1558679(+) (sxy/tfoX) [Enterobacter asburiae strain RHBSTW-01009]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=458308 HV349_RS07460 WP_023311030.1 1558053..1558679(+) (sxy/tfoX) [Enterobacter asburiae strain RHBSTW-01009]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGCGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAGGTTTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCGGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567