Detailed information NTG0045830

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: TCCBUS3UF1_RS08415
• Genome accession: NC_017278
• Coordinates: 1695969..1696883 (+)
• Length: 304 a.a.
• NCBI ID: WP_014516096.1
• Uniprot ID: -
• Organism: Thermus sp. CCB_US3_UF1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1690969..1701883

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TCCBUS3UF1_RS08390	prmC	1691124..1691942 (+)	819	WP_041433845.1	peptide chain release factor N(5)-glutamine methyltransferase	-
TCCBUS3UF1_RS08395 (TCCBUS3UF1_16950)	-	1691889..1693295 (-)	1407	WP_014516092.1	DUF3084 domain-containing protein	-
TCCBUS3UF1_RS08400 (TCCBUS3UF1_16960)	lptB	1693296..1694024 (-)	729	WP_014516093.1	LPS export ABC transporter ATP-binding protein	-
TCCBUS3UF1_RS08405 (TCCBUS3UF1_16970)	gltX	1694079..1695494 (+)	1416	WP_014516094.1	glutamate--tRNA ligase	-
TCCBUS3UF1_RS08410 (TCCBUS3UF1_16980)	-	1695529..1695969 (+)	441	WP_014516095.1	hypothetical protein	-
TCCBUS3UF1_RS08415 (TCCBUS3UF1_16990)	pilA	1695969..1696883 (+)	915	WP_014516096.1	signal recognition particle-docking protein FtsY	Machinery gene
TCCBUS3UF1_RS11895 (TCCBUS3UF1_17000)	-	1696880..1697026 (-)	147	WP_014516097.1	DUF5522 domain-containing protein	-
TCCBUS3UF1_RS08420 (TCCBUS3UF1_17010)	-	1697057..1697464 (+)	408	WP_041434017.1	disulfide oxidoreductase	-
TCCBUS3UF1_RS08425 (TCCBUS3UF1_17020)	-	1697766..1698479 (-)	714	WP_014516099.1	hypothetical protein	-
TCCBUS3UF1_RS08430 (TCCBUS3UF1_17030)	-	1698490..1700604 (-)	2115	WP_014516100.1	ATP-dependent helicase	-
TCCBUS3UF1_RS08435 (TCCBUS3UF1_17040)	-	1700639..1701532 (+)	894	WP_014516101.1	phosphoglucomutase	-

Sequence

Protein

• Length: 304 a.a.
• Molecular weight: 32510.79 Da
• Isoelectric Point: 8.0809

>NTDB_id=45830 TCCBUS3UF1_RS08415 WP_014516096.1 1695969..1696883(+) (pilA) [Thermus sp. CCB_US3_UF1]
MGFLDRLKAGLAKTREKLLGAIPWGANPEEVLEELEMALLAADVGLAATEELLAQVRASGRKDLKEAVKEKLVAMLEPDP
RRATLRKLGFRPQNPKPVEPQGHVVMVVGVNGVGKTTTIAKLGRHYQELGKKVMFCAGDTFRAAGGMQLAEWGKRLGIPV
LQGAEGADPAGLAFDAAQARKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIGKADPGEPGEVWLVLDAVTGQNGLEQA
KRFHEAVGLTGVIVTKLDGTAKGGVLVPIVRTLGVPIRFIGVGEGPEDLQPFDAEAFVEALLEA

Nucleotide

• Length: 915 bp

>NTDB_id=45830 TCCBUS3UF1_RS08415 WP_014516096.1 1695969..1696883(+) (pilA) [Thermus sp. CCB_US3_UF1]
ATGGGCTTCTTGGACCGCCTGAAGGCGGGGCTGGCCAAAACGCGGGAAAAACTCCTCGGGGCCATCCCCTGGGGCGCCAA
CCCCGAGGAGGTGCTGGAGGAGCTGGAGATGGCCCTCCTGGCCGCCGACGTGGGCCTGGCCGCCACCGAGGAGCTCCTTG
CCCAAGTGCGGGCTTCGGGGCGCAAGGACCTCAAGGAGGCGGTGAAGGAAAAGCTGGTGGCCATGCTGGAGCCCGACCCG
CGCCGGGCCACGCTGCGCAAGCTGGGCTTCCGCCCGCAAAACCCCAAGCCCGTGGAGCCCCAGGGGCACGTGGTCATGGT
GGTGGGGGTCAACGGGGTGGGCAAGACCACCACCATCGCCAAGCTGGGCCGCCATTACCAGGAGCTGGGCAAAAAGGTGA
TGTTCTGCGCCGGGGACACCTTCCGCGCCGCCGGGGGCATGCAGCTTGCGGAGTGGGGCAAGCGCCTGGGCATCCCCGTC
CTCCAGGGCGCGGAAGGGGCAGACCCCGCGGGTCTAGCCTTTGACGCCGCCCAGGCCCGCAAGGCGCGAGGGTACGACCT
CCTTTTCGTGGACACCGCAGGCCGCCTGCACACCAAGCACAACCTCATGGAGGAGCTGAAAAAGGTCAAACGGGCCATCG
GCAAAGCCGACCCTGGGGAACCTGGGGAGGTCTGGCTGGTGCTGGATGCGGTCACGGGGCAAAACGGCCTCGAGCAAGCC
AAGAGGTTCCACGAGGCTGTGGGCCTTACCGGGGTAATCGTGACCAAGCTGGACGGCACCGCCAAGGGAGGGGTGTTGGT
GCCCATCGTGCGCACCCTAGGGGTGCCCATCCGCTTCATCGGGGTAGGGGAAGGCCCGGAAGACCTGCAACCCTTTGACG
CCGAGGCCTTTGTAGAGGCCCTTCTGGAAGCCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (29-70)

• SRP54-type protein, GTPase domain (SRP54) (103-302)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.045	100	0.507