Detailed information
Bioinformatically predicted
Overview
| Name | clpE | Type | Regulator |
| Locus tag | JJN14_RS08690 | Genome accession | NZ_CP067992 |
| Coordinates | 1771389..1773494 (-) | Length | 701 a.a. |
| NCBI ID | WP_201058442.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain S022-V7-A3 | ||
| Function | repress competence development (at the early growth phase) (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1766389..1778494
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JJN14_RS08675 (JJN14_08675) | - | 1767508..1769115 (-) | 1608 | WP_201058440.1 | glycoside hydrolase family 13 protein | - |
| JJN14_RS08680 (JJN14_08680) | - | 1769268..1770752 (+) | 1485 | WP_201058441.1 | DUF1846 domain-containing protein | - |
| JJN14_RS08685 (JJN14_08685) | - | 1770847..1771329 (+) | 483 | WP_000032547.1 | S-ribosylhomocysteine lyase | - |
| JJN14_RS08690 (JJN14_08690) | clpE | 1771389..1773494 (-) | 2106 | WP_201058442.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| JJN14_RS08695 (JJN14_08695) | pflB | 1773960..1776284 (-) | 2325 | WP_020901544.1 | formate C-acetyltransferase | - |
| JJN14_RS08700 (JJN14_08700) | dinB | 1776524..1777585 (+) | 1062 | WP_201058443.1 | DNA polymerase IV | - |
| JJN14_RS08705 (JJN14_08705) | - | 1777618..1778463 (-) | 846 | WP_201058444.1 | undecaprenyl-diphosphate phosphatase | - |
Sequence
Protein
Download Length: 701 a.a. Molecular weight: 77609.31 Da Isoelectric Point: 4.6889
>NTDB_id=458262 JJN14_RS08690 WP_201058442.1 1771389..1773494(-) (clpE) [Streptococcus mitis strain S022-V7-A3]
MNNNFNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAHYRATGQLPGNAESDAQMQQQASGMKQDGVLAKLG
RNLTAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGL
EAGTQYRGSFEENVQNLVNEVKEAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYKILQGIRDLYQQHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEREIEAEKDKQEKAVEAEDFEAALNYKTRIAELEKKIENHTEDMKVTASVNDVAESVERMTGIPVSQMGA
SDIERLKDMAHRLQDKVIGQDKVVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLTKEDLSKIVDLMLAEVNQTLAKKDIDLVVS
QAAKDYITEEGYDEVMGVRPLRRVVEQEIRDKVTDFHLDHLDAKHLEADMEDGDLIIREKA
MNNNFNNFNNMDDLFNQLMGGMRGYSSENRRYLINGREVTPEEFAHYRATGQLPGNAESDAQMQQQASGMKQDGVLAKLG
RNLTAEAREGKLDPVIGRNKEIQETSEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVNGDVPAAIKNKEIISIDISGL
EAGTQYRGSFEENVQNLVNEVKEAGNIILFFDEIHQILGAGSTGGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTI
LKNAALARRFNEVKVNAPSAEDTYKILQGIRDLYQQHHNVILPDEVLKAAVDYSVQYIPQRSLPDKAIDLVDVTAAHLAA
QHPVTDVHAVEREIEAEKDKQEKAVEAEDFEAALNYKTRIAELEKKIENHTEDMKVTASVNDVAESVERMTGIPVSQMGA
SDIERLKDMAHRLQDKVIGQDKVVEAVARAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGTKDAIIRLD
MSEYSDRTAVSKLIGTTAGYVGYDDNSNTLTERVRRNPYSIILLDEIEKADPQVITLLLQVLDDGRLTDGQGNTVNFKNT
VIIATSNAGFGYEANLTEDADKPELMDRLKPFFRPEFLNRFNAVIEFSHLTKEDLSKIVDLMLAEVNQTLAKKDIDLVVS
QAAKDYITEEGYDEVMGVRPLRRVVEQEIRDKVTDFHLDHLDAKHLEADMEDGDLIIREKA
Nucleotide
Download Length: 2106 bp
>NTDB_id=458262 JJN14_RS08690 WP_201058442.1 1771389..1773494(-) (clpE) [Streptococcus mitis strain S022-V7-A3]
ATGAACAACAACTTTAATAATTTTAACAACATGGATGATTTATTTAACCAATTGATGGGTGGTATGCGAGGATATAGTTC
TGAAAATCGCCGTTACTTGATTAATGGACGTGAAGTCACACCTGAGGAATTTGCTCACTATCGTGCAACTGGTCAATTGC
CAGGAAATGCAGAATCTGATGCGCAAATGCAACAACAGGCTTCAGGTATGAAACAAGACGGTGTCCTTGCCAAACTAGGT
CGTAACTTGACAGCGGAAGCTCGTGAGGGTAAGTTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGA
AATTCTATCACGCCGTACCAAGAATAATCCTGTTTTGGTTGGAGATGCAGGTGTTGGTAAGACAGCGGTTGTAGAAGGTC
TAGCACAAGCCATTGTGAACGGAGATGTCCCAGCCGCTATTAAGAACAAGGAAATTATTTCCATTGATATTTCAGGCCTT
GAGGCTGGTACTCAGTACCGTGGTAGCTTTGAAGAAAACGTTCAAAACTTAGTCAATGAAGTGAAAGAAGCAGGGAATAT
TATCCTCTTCTTTGATGAAATTCACCAAATCCTTGGCGCTGGTAGCACTGGTGGAGATAGTGGTTCTAAAGGGCTTGCGG
ACATTCTCAAGCCAGCTCTCTCTCGAGGTGAGTTGACAGTTATTGGGGCAACGACTCAAGACGAATACCGTAACACGATT
TTGAAGAATGCAGCTCTTGCTCGTCGTTTCAACGAAGTCAAGGTCAATGCTCCTTCAGCAGAGGATACATATAAAATCCT
TCAAGGAATTCGTGACCTTTATCAACAACACCACAATGTCATCTTGCCAGATGAAGTCTTGAAAGCAGCAGTGGATTATT
CTGTTCAATACATTCCTCAACGTAGCTTGCCAGATAAGGCTATTGACCTTGTTGATGTAACAGCAGCTCACTTGGCAGCT
CAACATCCTGTAACAGATGTTCATGCTGTTGAACGTGAAATTGAAGCAGAAAAAGACAAGCAAGAAAAAGCAGTAGAGGC
AGAAGATTTTGAAGCAGCCCTAAACTATAAAACACGCATTGCAGAATTGGAAAAGAAAATCGAAAACCACACAGAAGATA
TGAAGGTGACTGCAAGTGTCAACGATGTGGCTGAATCTGTAGAACGAATGACGGGTATCCCGGTTTCACAAATGGGAGCA
TCAGACATCGAACGTTTGAAAGATATGGCTCATCGTCTGCAAGACAAGGTGATCGGCCAAGACAAGGTAGTTGAAGCAGT
GGCTCGTGCCATCCGTCGTAACCGTGCTGGTTTCGATGAAGGCAATCGCCCAATCGGTAGCTTCCTCTTTGTAGGGCCTA
CTGGGGTCGGTAAAACTGAGTTAGCTAAGCAATTAGCGCTCGATATGTTTGGAACTAAGGATGCTATCATTCGGTTGGAT
ATGTCTGAATACAGTGACCGCACAGCCGTTTCTAAATTGATCGGTACAACAGCTGGTTATGTGGGGTATGATGATAATAG
TAATACCTTGACAGAACGTGTTCGTCGCAATCCTTACTCTATCATTCTCTTGGATGAAATTGAAAAGGCTGATCCTCAAG
TCATTACCCTTCTCCTTCAAGTATTGGATGATGGGCGTTTGACAGATGGTCAAGGAAATACAGTAAACTTCAAGAACACT
GTCATTATCGCGACCTCAAATGCTGGATTTGGCTATGAAGCCAACTTGACAGAAGATGCGGACAAACCAGAATTGATGGA
CCGTTTGAAACCATTCTTCCGTCCAGAATTCCTCAACCGCTTTAATGCAGTTATCGAGTTCTCACACTTGACGAAGGAAG
ACCTTTCTAAGATTGTGGACTTGATGTTGGCTGAAGTCAACCAAACCTTGGCTAAGAAAGACATTGATTTGGTAGTCAGT
CAAGCGGCTAAAGACTATATCACAGAAGAAGGCTATGACGAAGTTATGGGTGTTCGCCCTCTCCGTCGCGTGGTTGAACA
AGAAATTCGTGATAAGGTGACAGATTTCCACTTGGATCATCTAGATGCCAAACATCTGGAAGCAGATATGGAAGATGGTG
ATTTGATCATTCGTGAAAAAGCCTAA
ATGAACAACAACTTTAATAATTTTAACAACATGGATGATTTATTTAACCAATTGATGGGTGGTATGCGAGGATATAGTTC
TGAAAATCGCCGTTACTTGATTAATGGACGTGAAGTCACACCTGAGGAATTTGCTCACTATCGTGCAACTGGTCAATTGC
CAGGAAATGCAGAATCTGATGCGCAAATGCAACAACAGGCTTCAGGTATGAAACAAGACGGTGTCCTTGCCAAACTAGGT
CGTAACTTGACAGCGGAAGCTCGTGAGGGTAAGTTGGATCCTGTTATCGGACGAAACAAGGAAATTCAAGAAACATCTGA
AATTCTATCACGCCGTACCAAGAATAATCCTGTTTTGGTTGGAGATGCAGGTGTTGGTAAGACAGCGGTTGTAGAAGGTC
TAGCACAAGCCATTGTGAACGGAGATGTCCCAGCCGCTATTAAGAACAAGGAAATTATTTCCATTGATATTTCAGGCCTT
GAGGCTGGTACTCAGTACCGTGGTAGCTTTGAAGAAAACGTTCAAAACTTAGTCAATGAAGTGAAAGAAGCAGGGAATAT
TATCCTCTTCTTTGATGAAATTCACCAAATCCTTGGCGCTGGTAGCACTGGTGGAGATAGTGGTTCTAAAGGGCTTGCGG
ACATTCTCAAGCCAGCTCTCTCTCGAGGTGAGTTGACAGTTATTGGGGCAACGACTCAAGACGAATACCGTAACACGATT
TTGAAGAATGCAGCTCTTGCTCGTCGTTTCAACGAAGTCAAGGTCAATGCTCCTTCAGCAGAGGATACATATAAAATCCT
TCAAGGAATTCGTGACCTTTATCAACAACACCACAATGTCATCTTGCCAGATGAAGTCTTGAAAGCAGCAGTGGATTATT
CTGTTCAATACATTCCTCAACGTAGCTTGCCAGATAAGGCTATTGACCTTGTTGATGTAACAGCAGCTCACTTGGCAGCT
CAACATCCTGTAACAGATGTTCATGCTGTTGAACGTGAAATTGAAGCAGAAAAAGACAAGCAAGAAAAAGCAGTAGAGGC
AGAAGATTTTGAAGCAGCCCTAAACTATAAAACACGCATTGCAGAATTGGAAAAGAAAATCGAAAACCACACAGAAGATA
TGAAGGTGACTGCAAGTGTCAACGATGTGGCTGAATCTGTAGAACGAATGACGGGTATCCCGGTTTCACAAATGGGAGCA
TCAGACATCGAACGTTTGAAAGATATGGCTCATCGTCTGCAAGACAAGGTGATCGGCCAAGACAAGGTAGTTGAAGCAGT
GGCTCGTGCCATCCGTCGTAACCGTGCTGGTTTCGATGAAGGCAATCGCCCAATCGGTAGCTTCCTCTTTGTAGGGCCTA
CTGGGGTCGGTAAAACTGAGTTAGCTAAGCAATTAGCGCTCGATATGTTTGGAACTAAGGATGCTATCATTCGGTTGGAT
ATGTCTGAATACAGTGACCGCACAGCCGTTTCTAAATTGATCGGTACAACAGCTGGTTATGTGGGGTATGATGATAATAG
TAATACCTTGACAGAACGTGTTCGTCGCAATCCTTACTCTATCATTCTCTTGGATGAAATTGAAAAGGCTGATCCTCAAG
TCATTACCCTTCTCCTTCAAGTATTGGATGATGGGCGTTTGACAGATGGTCAAGGAAATACAGTAAACTTCAAGAACACT
GTCATTATCGCGACCTCAAATGCTGGATTTGGCTATGAAGCCAACTTGACAGAAGATGCGGACAAACCAGAATTGATGGA
CCGTTTGAAACCATTCTTCCGTCCAGAATTCCTCAACCGCTTTAATGCAGTTATCGAGTTCTCACACTTGACGAAGGAAG
ACCTTTCTAAGATTGTGGACTTGATGTTGGCTGAAGTCAACCAAACCTTGGCTAAGAAAGACATTGATTTGGTAGTCAGT
CAAGCGGCTAAAGACTATATCACAGAAGAAGGCTATGACGAAGTTATGGGTGTTCGCCCTCTCCGTCGCGTGGTTGAACA
AGAAATTCGTGATAAGGTGACAGATTTCCACTTGGATCATCTAGATGCCAAACATCTGGAAGCAGATATGGAAGATGGTG
ATTTGATCATTCGTGAAAAAGCCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpE | Streptococcus mutans UA159 |
50.311 |
91.869 |
0.462 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.844 |
91.298 |
0.455 |
| clpE | Streptococcus pneumoniae D39 |
48.819 |
90.585 |
0.442 |
| clpE | Streptococcus pneumoniae R6 |
48.819 |
90.585 |
0.442 |
| clpE | Streptococcus pneumoniae Rx1 |
48.819 |
90.585 |
0.442 |
| clpE | Streptococcus pneumoniae TIGR4 |
48.819 |
90.585 |
0.442 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
44.684 |
92.582 |
0.414 |
| clpC | Streptococcus pneumoniae Rx1 |
42.925 |
89.729 |
0.385 |
| clpC | Streptococcus pneumoniae D39 |
42.925 |
89.729 |
0.385 |
| clpC | Streptococcus pneumoniae TIGR4 |
42.766 |
89.729 |
0.384 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
43.112 |
88.017 |
0.379 |
| clpC | Streptococcus thermophilus LMD-9 |
42.903 |
88.445 |
0.379 |
| clpC | Streptococcus thermophilus LMG 18311 |
42.742 |
88.445 |
0.378 |
| clpC | Streptococcus mutans UA159 |
42.233 |
88.16 |
0.372 |