Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   JJN14_RS04985 Genome accession   NZ_CP067992
Coordinates   1015935..1016399 (-) Length   154 a.a.
NCBI ID   WP_001135768.1    Uniprot ID   A4L7L7
Organism   Streptococcus mitis strain S022-V7-A3     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1010935..1021399
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JJN14_RS04965 (JJN14_04965) - 1011120..1012112 (-) 993 WP_000448714.1 alpha-ketoacid dehydrogenase subunit beta -
  JJN14_RS04970 (JJN14_04970) - 1012128..1013096 (-) 969 WP_201059111.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  JJN14_RS04975 (JJN14_04975) pdrM 1013251..1014612 (-) 1362 WP_201059112.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  JJN14_RS04980 (JJN14_04980) - 1014654..1015922 (-) 1269 WP_201059113.1 dihydroorotase -
  JJN14_RS04985 (JJN14_04985) mutX 1015935..1016399 (-) 465 WP_001135768.1 NUDIX hydrolase Machinery gene
  JJN14_RS04990 (JJN14_04990) - 1016409..1017062 (-) 654 WP_201059114.1 uracil-DNA glycosylase -
  JJN14_RS04995 (JJN14_04995) - 1017124..1017816 (-) 693 WP_201057996.1 YjjG family noncanonical pyrimidine nucleotidase -
  JJN14_RS05000 (JJN14_05000) - 1017973..1018167 (+) 195 Protein_934 DUF5960 family protein -
  JJN14_RS05005 (JJN14_05005) - 1018208..1018786 (-) 579 WP_201057997.1 hypothetical protein -
  JJN14_RS05010 (JJN14_05010) - 1018822..1020591 (-) 1770 WP_201057998.1 DUF262 domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17812.16 Da        Isoelectric Point: 4.2287

>NTDB_id=458226 JJN14_RS04985 WP_001135768.1 1015935..1016399(-) (mutX) [Streptococcus mitis strain S022-V7-A3]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=458226 JJN14_RS04985 WP_001135768.1 1015935..1016399(-) (mutX) [Streptococcus mitis strain S022-V7-A3]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGGAAAGAACTGCTCATGCTTCATCGCAATAAGAAGCCTAATGA
TGTCCATGAAGGCAAATGGATTGGTGTGGGTGGTAAGCTAGAGCGAGGGGAGACCCCTCAAGAATGCGCGGCGCGTGAAA
TCCTCGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGCGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTTGAGGGTGACTTGATCGACTGCAATGAGGGGACCTTAGAATGGGTTCC
CTATGATGAAGTTCTGAGCAAGCCAACTTGGGAGGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTCGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A4L7L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.701

100

0.987