Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HWQ18_RS01585 Genome accession   NZ_CP056119
Coordinates   313699..314325 (-) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain D42-sc-1712201     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 308699..319325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HWQ18_RS01570 (HWQ18_01570) helD 308938..310992 (-) 2055 WP_032681322.1 DNA helicase IV -
  HWQ18_RS01575 (HWQ18_01575) - 311115..311560 (+) 446 Protein_309 YccF domain-containing protein -
  HWQ18_RS01580 (HWQ18_01580) yccS 311580..313742 (+) 2163 WP_020884791.1 YccS family putative transporter -
  HWQ18_RS01585 (HWQ18_01585) sxy/tfoX 313699..314325 (-) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  HWQ18_RS01590 (HWQ18_01590) sulA 314543..315052 (+) 510 WP_032677816.1 SOS-induced cell division inhibitor SulA -
  HWQ18_RS01595 (HWQ18_01595) ompA 315406..316461 (+) 1056 WP_020884794.1 porin OmpA -
  HWQ18_RS01600 (HWQ18_01600) matP 316530..316982 (-) 453 WP_014169429.1 macrodomain Ter protein MatP -
  HWQ18_RS01605 (HWQ18_01605) - 317169..318929 (+) 1761 WP_032681323.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=458184 HWQ18_RS01585 WP_020884792.1 313699..314325(-) (sxy/tfoX) [Enterobacter ludwigii strain D42-sc-1712201]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=458184 HWQ18_RS01585 WP_020884792.1 313699..314325(-) (sxy/tfoX) [Enterobacter ludwigii strain D42-sc-1712201]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGTGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGACGGGGAGCTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCATCATTCTTAACCCTGATGAAACGGGGTCGCCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGGCTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGGGCCCGTGCGAGCTGGCTGAAGATGCGGGCGAAGAAT
AAAGCGCTCAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577