Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HWQ56_RS27035 Genome accession   NZ_CP056030
Coordinates   6025409..6025807 (-) Length   132 a.a.
NCBI ID   WP_158153386.1    Uniprot ID   A0A7D5DA18
Organism   Pseudomonas eucalypticola strain NP-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6020409..6030807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HWQ56_RS27020 (HWQ56_27020) - 6022357..6024405 (-) 2049 WP_158153383.1 methyl-accepting chemotaxis protein -
  HWQ56_RS27025 (HWQ56_27025) - 6024479..6025012 (-) 534 WP_176572165.1 chemotaxis protein CheW -
  HWQ56_RS27030 (HWQ56_27030) pilH 6025022..6025387 (-) 366 WP_158153385.1 twitching motility response regulator PilH -
  HWQ56_RS27035 (HWQ56_27035) pilG 6025409..6025807 (-) 399 WP_158153386.1 twitching motility response regulator PilG Regulator
  HWQ56_RS27040 (HWQ56_27040) gshB 6026075..6027028 (+) 954 WP_176572166.1 glutathione synthase -
  HWQ56_RS27045 (HWQ56_27045) - 6027139..6028044 (+) 906 WP_176572167.1 energy transducer TonB -
  HWQ56_RS27050 (HWQ56_27050) - 6028108..6028677 (+) 570 WP_158153389.1 YqgE/AlgH family protein -
  HWQ56_RS27055 (HWQ56_27055) ruvX 6028677..6029117 (+) 441 WP_158153390.1 Holliday junction resolvase RuvX -
  HWQ56_RS27060 (HWQ56_27060) pyrR 6029171..6029689 (+) 519 WP_158153391.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HWQ56_RS27065 (HWQ56_27065) - 6029702..6030706 (+) 1005 WP_158153392.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14497.88 Da        Isoelectric Point: 8.5417

>NTDB_id=457973 HWQ56_RS27035 WP_158153386.1 6025409..6025807(-) (pilG) [Pseudomonas eucalypticola strain NP-1]
MKQHPAALKVMVIDDSKTIRRTAQMLLENVGCEVITATDGFDALAKIADNHPRIIFVDIMMPRLDGYQTCALIKNNSAFK
TTPVIMLSSRDGLFDKARGRIVGSDQFLTKPFSQEELVGAIRAHVPGFAAAH

Nucleotide


Download         Length: 399 bp        

>NTDB_id=457973 HWQ56_RS27035 WP_158153386.1 6025409..6025807(-) (pilG) [Pseudomonas eucalypticola strain NP-1]
ATGAAACAGCACCCCGCAGCGCTCAAGGTGATGGTGATCGACGACTCGAAGACGATTCGCCGCACTGCCCAGATGCTCCT
GGAAAACGTCGGTTGCGAGGTGATCACCGCCACCGACGGTTTCGATGCATTGGCCAAGATTGCCGACAACCATCCGCGTA
TCATCTTTGTGGATATCATGATGCCGCGCCTGGACGGCTATCAGACCTGTGCACTGATCAAGAACAACAGCGCTTTCAAG
ACCACCCCGGTCATCATGCTGTCGTCCCGCGACGGCTTGTTCGACAAGGCTCGTGGGCGCATCGTGGGTTCCGATCAGTT
CTTGACCAAGCCTTTTAGCCAGGAAGAACTGGTGGGGGCCATCAGGGCCCATGTACCGGGGTTCGCCGCCGCGCACTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7D5DA18

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.729

89.394

0.659