Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   HUK62_RS15635 Genome accession   NZ_CP055277
Coordinates   3225946..3226803 (-) Length   285 a.a.
NCBI ID   WP_062032467.1    Uniprot ID   A0A7H8SLC5
Organism   Acinetobacter sp. NEB 394     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3220946..3231803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUK62_RS15615 (HUK62_15615) miaB 3222279..3223736 (+) 1458 WP_176538314.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -
  HUK62_RS15620 (HUK62_15620) - 3223775..3224851 (+) 1077 WP_004977846.1 PhoH family protein -
  HUK62_RS15625 (HUK62_15625) ybeY 3224909..3225388 (+) 480 WP_004691232.1 rRNA maturation RNase YbeY -
  HUK62_RS15630 (HUK62_15630) - 3225490..3225900 (+) 411 WP_005401251.1 hypothetical protein -
  HUK62_RS15635 (HUK62_15635) tonB2 3225946..3226803 (-) 858 WP_062032467.1 TonB family protein Machinery gene
  HUK62_RS15640 (HUK62_15640) - 3227065..3227742 (+) 678 WP_004977854.1 hypothetical protein -
  HUK62_RS15645 (HUK62_15645) - 3227898..3228608 (+) 711 WP_176538315.1 DUF3108 domain-containing protein -
  HUK62_RS15650 (HUK62_15650) - 3228699..3229274 (+) 576 WP_004691243.1 xanthine phosphoribosyltransferase -
  HUK62_RS19125 - 3229552..3230067 (+) 516 WP_228723710.1 GAF domain-containing protein -
  HUK62_RS19130 - 3230103..3230606 (+) 504 WP_228723711.1 GGDEF domain-containing protein -
  HUK62_RS15660 (HUK62_15660) - 3230819..3231193 (+) 375 WP_004691247.1 hypothetical protein -

Sequence

Protein


Download         Length: 285 a.a.        Molecular weight: 32599.09 Da        Isoelectric Point: 6.3661

>NTDB_id=457389 HUK62_RS15635 WP_062032467.1 3225946..3226803(-) (tonB2) [Acinetobacter sp. NEB 394]
MPLAHDWWKDPIFTATVVLAVFLHLVILTLQFAMPQENDAAVKEIAVTLRPSDQKIENADFLAQADQQGSGTFRESHRMS
SDMPAPMLEQSTGEQQRETLEQIQQKRELNFEEKLLMTTLSWQKQAEDNQRKKAMEEMNSQFQAKAAMVASLEAQYLQRQ
QNFSRQQKIKTVDGIQAKQDISAAYLEKFRQKVEFYGNRYYPEAAKQQRLAGEVRLMVILNASGGIRAIRLIDSSGHEML
DEAAKASVRKAAPFGGFDAKMKDISELRIVRTWRFDPAEAEFEVH

Nucleotide


Download         Length: 858 bp        

>NTDB_id=457389 HUK62_RS15635 WP_062032467.1 3225946..3226803(-) (tonB2) [Acinetobacter sp. NEB 394]
ATGCCTTTGGCTCATGATTGGTGGAAAGACCCAATTTTTACAGCGACCGTCGTACTGGCGGTATTTTTGCATCTCGTGAT
TTTGACTTTGCAATTTGCGATGCCTCAAGAAAATGATGCGGCAGTGAAAGAAATTGCCGTTACCTTGCGTCCTTCTGATC
AAAAAATTGAAAATGCAGATTTTTTAGCGCAAGCCGATCAACAAGGTTCAGGGACCTTTCGTGAGTCACATCGCATGTCG
AGTGACATGCCCGCACCGATGCTTGAGCAAAGTACAGGCGAACAGCAGCGTGAAACTTTAGAACAGATCCAACAAAAACG
TGAGCTGAATTTTGAAGAAAAACTGTTAATGACGACTTTGAGTTGGCAAAAACAAGCTGAGGATAATCAGCGCAAAAAAG
CCATGGAAGAAATGAATAGCCAGTTTCAAGCCAAAGCAGCCATGGTGGCCAGCCTTGAAGCGCAATATTTACAGCGCCAA
CAAAACTTTAGCCGTCAGCAAAAAATCAAAACAGTCGATGGGATTCAAGCCAAGCAAGATATTTCGGCCGCCTATCTTGA
AAAGTTCCGTCAGAAAGTGGAGTTTTATGGCAACCGTTACTATCCAGAAGCAGCTAAACAGCAGCGGCTGGCGGGTGAAG
TGCGTTTAATGGTGATTCTAAATGCATCAGGAGGCATCCGTGCTATTCGCCTGATTGATAGTTCAGGTCATGAGATGCTC
GATGAGGCGGCAAAAGCATCGGTACGTAAGGCTGCACCATTTGGTGGATTTGATGCCAAAATGAAGGATATTTCTGAGTT
ACGCATTGTGCGTACATGGCGTTTTGACCCAGCAGAGGCAGAGTTTGAAGTGCACTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(198-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SLC5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

74.286

98.246

0.73