Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   HUK62_RS03185 Genome accession   NZ_CP055277
Coordinates   700905..703127 (-) Length   740 a.a.
NCBI ID   WP_176537071.1    Uniprot ID   A0A7H8SD16
Organism   Acinetobacter sp. NEB 394     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 695905..708127
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUK62_RS03160 (HUK62_03160) - 695937..696293 (-) 357 WP_004978810.1 chaperone modulator CbpM -
  HUK62_RS03165 (HUK62_03165) - 696304..697257 (-) 954 WP_176538437.1 DnaJ C-terminal domain-containing protein -
  HUK62_RS03170 (HUK62_03170) - 697402..697854 (-) 453 WP_176537068.1 DUF2147 domain-containing protein -
  HUK62_RS03175 (HUK62_03175) - 698055..698930 (-) 876 WP_176537069.1 Hsp33 family molecular chaperone HslO -
  HUK62_RS03180 (HUK62_03180) - 698981..700822 (-) 1842 WP_176537070.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  HUK62_RS03185 (HUK62_03185) priA 700905..703127 (-) 2223 WP_176537071.1 primosomal protein N' Machinery gene
  HUK62_RS03190 (HUK62_03190) gspF 703280..704485 (+) 1206 WP_058868820.1 type II secretion system inner membrane protein GspF -
  HUK62_RS03195 (HUK62_03195) gspG 704519..704956 (+) 438 WP_010325797.1 type II secretion system major pseudopilin GspG -
  HUK62_RS03200 (HUK62_03200) - 705240..705575 (+) 336 WP_004978824.1 hypothetical protein -
  HUK62_RS03205 (HUK62_03205) - 705737..706075 (+) 339 WP_004978826.1 tRNA-binding protein -
  HUK62_RS03210 (HUK62_03210) lnt 706142..707701 (-) 1560 WP_176537072.1 apolipoprotein N-acyltransferase -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84163.11 Da        Isoelectric Point: 8.8797

>NTDB_id=457371 HUK62_RS03185 WP_176537071.1 700905..703127(-) (priA) [Acinetobacter sp. NEB 394]
MPETTLSTTPSYRIRVAVPVYLYDCFDYSLTAEQYHQAEVGARVAVSFGRQNVVGVIVEKLTDEKPLDLGFKLKAITELL
DDSAILDAKVLSLLTWSAQYYQFPIGEVMHAALPSFLRQGKPYNLLARMWKLIDDHAEDKLKRSEKQQDAYKILKLHPTG
TSENILNLAGIETATLKALEKKQITQCILEAQDFKPQVMTLAQMPLTPNDEQKRAIQNILKARHSYHAFLLDGLTGSGKT
EVYLQVMQEILKQGKQVLVLVPEIGLTPQTVSRFQSRFHCHIALLHSGLNDSKRLQAWQSAQTGKASIVIGTRSAIYTPL
PHLGLIVLDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYALVEQGKMTRLELDQRAGVAVMPKMHV
IDLKVAQKQNGISQQLIHEVQKRLDKKEQVLIFLNRRGYAPVLICESCGWQAKCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPEHCPQCQHSELKPIGLGTAKVEENLQALFPNFDVIRVDRDSTSRVGSWQKIYNKIQKSEPIILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLLESGYRSFAKQTLKERKAAWM
PPYRYAALLRCESKDQELNQSFLQEHAQVLRQASENSIDIWGPIPAPMERKAGRYQAHMVLLSKDRARMHFYIRQWWQNV
WHNKPHGMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=457371 HUK62_RS03185 WP_176537071.1 700905..703127(-) (priA) [Acinetobacter sp. NEB 394]
ATGCCAGAAACTACACTTTCCACAACACCAAGCTACCGTATTCGTGTGGCTGTTCCCGTTTATCTATATGACTGTTTTGA
CTATAGTTTAACGGCTGAACAATACCACCAAGCTGAAGTGGGTGCACGTGTGGCTGTCTCATTTGGTCGCCAAAATGTGG
TCGGTGTCATTGTTGAGAAACTCACTGATGAGAAACCACTCGATTTAGGCTTTAAACTCAAAGCCATAACTGAGTTGCTC
GATGACAGCGCTATTCTAGATGCTAAAGTTTTAAGTTTATTGACATGGTCAGCGCAATATTACCAATTTCCCATTGGGGA
AGTGATGCATGCTGCTTTACCCAGCTTTTTACGCCAAGGTAAACCCTATAATTTACTGGCGCGGATGTGGAAGCTGATTG
ATGATCATGCCGAAGACAAATTGAAGCGTTCTGAAAAACAACAAGATGCCTATAAAATTTTAAAGCTGCATCCCACAGGA
ACGTCTGAAAACATTCTAAATTTGGCTGGCATTGAAACGGCGACCTTAAAAGCCTTAGAAAAAAAGCAAATCACCCAGTG
CATACTTGAAGCTCAAGACTTTAAACCGCAAGTTATGACACTGGCGCAAATGCCCCTCACGCCCAATGATGAACAAAAGC
GTGCCATTCAAAACATTCTCAAAGCTCGTCATAGCTACCATGCTTTCTTACTGGATGGTTTAACCGGTAGTGGGAAAACT
GAAGTCTATTTACAAGTCATGCAAGAGATTTTAAAACAAGGCAAACAGGTCTTGGTATTAGTGCCTGAAATTGGTCTCAC
CCCACAAACAGTGAGCCGTTTTCAGTCACGTTTTCACTGTCATATTGCGCTACTACATTCAGGTTTAAATGATTCTAAGC
GCCTTCAAGCCTGGCAAAGTGCGCAAACGGGCAAAGCCTCAATTGTGATTGGCACACGTTCTGCCATCTATACGCCCCTT
CCGCATTTGGGTTTGATTGTCTTAGATGAAGAGCATGATCTATCTTTCAAGCAACAAGAAGGCTTTCGCTACCATGCTCG
TGATGTGGCTTTATACCGTGCACACTTAGAAAACTGTCCGATTATCCTCGGTTCTGCAACGCCAAGTATCGACAGTTATG
CATTGGTTGAACAAGGTAAAATGACCCGTTTGGAGTTGGACCAACGTGCAGGTGTGGCCGTGATGCCGAAAATGCATGTG
ATCGATCTGAAAGTGGCACAGAAACAAAATGGCATCAGCCAACAGCTGATTCATGAAGTACAAAAGCGCTTAGACAAAAA
AGAACAGGTGCTGATTTTCTTAAACCGTCGCGGCTATGCGCCTGTGTTGATTTGTGAAAGTTGTGGCTGGCAGGCGAAGT
GCCCACATTGCGATGCCAATTTTACCGTGCATCGACAGCCCTACCAGCATTTGCACTGTCACCACTGCGGCACCATCCAC
CGCATGCCTGAACACTGCCCGCAATGTCAGCATAGCGAACTGAAACCAATTGGTTTAGGCACCGCAAAAGTTGAAGAAAA
CCTACAAGCACTGTTCCCCAACTTTGATGTAATTCGGGTGGATCGTGACTCGACCAGTCGGGTCGGTAGTTGGCAAAAAA
TCTATAACAAGATTCAGAAAAGTGAACCCATCATTTTGCTCGGTACTCAAATGCTGGCCAAAGGACATCACTTTCCTTAT
GTGACTTTGGTGGCGATTTTAGACATTGACTCAGGCTTACTCAGTGTTGACTTTCGTGCCACAGAACGTACTGCACAGCT
CATCATCCAAGTCGCGGGACGTGCTGGGCGTGGCGAGAAAAAAGGCGAAGTCTATTTACAAACTCTACGTCCAGATCATC
CTTTGCTGAATACCCTGCTGGAATCTGGCTATCGTAGCTTTGCCAAGCAAACGTTGAAAGAGCGTAAAGCTGCATGGATG
CCACCTTATCGCTATGCGGCTTTATTGCGCTGTGAATCCAAAGACCAAGAACTGAACCAAAGCTTTTTACAAGAGCATGC
ACAAGTACTGCGCCAAGCCTCCGAAAACAGTATTGATATTTGGGGGCCCATTCCTGCGCCGATGGAACGTAAAGCAGGCC
GCTATCAAGCGCATATGGTACTACTGTCCAAAGACCGTGCGCGGATGCATTTTTACATTCGTCAGTGGTGGCAAAATGTC
TGGCATAACAAACCGCATGGTATGAAATTGAGCCTTGATATTGATCCACAAGAGTTAAGTTAA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SD16

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.819

98.784

0.709