Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HUI94_RS04395 Genome accession   NZ_CP055276
Coordinates   895018..895644 (-) Length   208 a.a.
NCBI ID   WP_042719042.1    Uniprot ID   -
Organism   Enterobacter mori strain CX01     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 890018..900644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUI94_RS04380 (HUI94_04355) helD 890256..892310 (-) 2055 WP_218401726.1 DNA helicase IV -
  HUI94_RS04385 (HUI94_04360) - 892434..892880 (+) 447 WP_100165146.1 YccF domain-containing protein -
  HUI94_RS04390 (HUI94_04365) yccS 892899..895061 (+) 2163 WP_218401728.1 YccS family putative transporter -
  HUI94_RS04395 (HUI94_04370) sxy/tfoX 895018..895644 (-) 627 WP_042719042.1 TfoX/Sxy family DNA transformation protein Regulator
  HUI94_RS04400 (HUI94_04375) sulA 895862..896371 (+) 510 WP_100165147.1 SOS-induced cell division inhibitor SulA -
  HUI94_RS04405 (HUI94_04380) ompA 896727..897782 (+) 1056 WP_010429345.1 porin OmpA -
  HUI94_RS04410 (HUI94_04385) matP 897847..898299 (-) 453 WP_010429344.1 macrodomain Ter protein MatP -
  HUI94_RS04415 (HUI94_04390) - 898486..900246 (+) 1761 WP_182946646.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24057.66 Da        Isoelectric Point: 8.7699

>NTDB_id=457338 HUI94_RS04395 WP_042719042.1 895018..895644(-) (sxy/tfoX) [Enterobacter mori strain CX01]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDNAVFAMVSEGELYLRACEESARYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRDKLLQLSSFALDAARKERCQRHQRNRLKDLPNLTFQLEVLLLEAGITNEETLRELGARKCWLKMRSKN
KALSIKVLFALEGAIEGLHEAALPADIRRELTEWFNALPESQEHHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=457338 HUI94_RS04395 WP_042719042.1 895018..895644(-) (sxy/tfoX) [Enterobacter mori strain CX01]
ATGAAAAAGATATCTTATGAGCGGATTTATAAATCGCAGGAATACCTCTCACCGTTAGGCGAAATTCATCATCGGGCGCT
ATTCGGTGGGTACACCCTGGCGGTGGATAATGCGGTGTTCGCGATGGTGTCGGAGGGGGAACTCTACCTCCGGGCCTGTG
AAGAAAGTGCCAGGTATTGTGTAAAAAACGCCTCTTCGTTTCTGACGCTGATGAAACGGGGTCGTCCCGTCCTGCTTAAT
TATTATCGAGTGGACGACGGGCTGTGGCAGGACAGGGACAAATTGCTCCAGCTTTCCTCCTTTGCTCTCGACGCGGCAAG
GAAGGAGCGCTGCCAGCGCCATCAGCGCAACCGGCTAAAAGATCTTCCGAACCTGACCTTTCAACTTGAGGTGCTGCTTT
TAGAAGCAGGCATCACGAATGAGGAAACCTTACGGGAACTGGGCGCCAGGAAATGCTGGTTAAAGATGAGGTCCAAAAAC
AAAGCCTTAAGTATTAAGGTGCTGTTCGCGCTGGAAGGTGCCATCGAAGGGCTACATGAAGCGGCGCTCCCGGCCGACAT
TCGCCGGGAGCTGACAGAGTGGTTTAATGCGCTGCCCGAGAGTCAGGAGCATCATTCCTCAAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.621

97.596

0.572