Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   HUW50_RS11975 Genome accession   NZ_CP055263
Coordinates   2532171..2532971 (+) Length   266 a.a.
NCBI ID   WP_185653945.1    Uniprot ID   -
Organism   Metabacillus sp. KUDC1714     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context


Location: 2527171..2537971
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW50_RS27085 - 2527224..2527745 (-) 522 Protein_2268 N-acetylmuramoyl-L-alanine amidase family protein -
  HUW50_RS11950 (HUW50_11950) - 2528046..2528237 (-) 192 WP_066335972.1 YfhD family protein -
  HUW50_RS11955 (HUW50_11955) - 2528483..2528611 (-) 129 WP_232329061.1 YfhE family protein -
  HUW50_RS11960 (HUW50_11960) - 2528749..2529306 (-) 558 WP_066335975.1 GNAT family N-acetyltransferase -
  HUW50_RS11965 (HUW50_11965) - 2529758..2530888 (-) 1131 WP_066335983.1 amidohydrolase -
  HUW50_RS11970 (HUW50_11970) - 2531172..2532071 (-) 900 WP_066335987.1 TIGR01777 family oxidoreductase -
  HUW50_RS11975 (HUW50_11975) recX 2532171..2532971 (+) 801 WP_185653945.1 recombination regulator RecX Regulator
  HUW50_RS11980 (HUW50_11980) - 2532995..2533312 (+) 318 WP_157094448.1 YfhH family protein -
  HUW50_RS11985 (HUW50_11985) - 2533346..2533501 (-) 156 WP_083964705.1 YpzG family protein -
  HUW50_RS11990 (HUW50_11990) - 2533531..2533695 (-) 165 WP_066335991.1 small, acid-soluble spore protein K -
  HUW50_RS11995 (HUW50_11995) - 2533807..2534076 (+) 270 WP_066335996.1 YfhJ family protein -
  HUW50_RS12000 (HUW50_12000) - 2534208..2535188 (-) 981 WP_066335998.1 metal-dependent hydrolase -
  HUW50_RS12005 (HUW50_12005) mutY 2535423..2536523 (+) 1101 WP_066336000.1 A/G-specific adenine glycosylase -
  HUW50_RS12010 (HUW50_12010) - 2536535..2536759 (-) 225 WP_066336008.1 cytosolic protein -
  HUW50_RS12015 (HUW50_12015) fabL 2536896..2537651 (+) 756 WP_066336011.1 enoyl-[acyl-carrier-protein] reductase FabL -
  HUW50_RS12020 (HUW50_12020) - 2537732..2537941 (+) 210 WP_066336014.1 gamma-type small acid-soluble spore protein -

Sequence


Protein


Download         Length: 266 a.a.        Molecular weight: 31345.64 Da        Isoelectric Point: 5.5155

>NTDB_id=457307 HUW50_RS11975 WP_185653945.1 2532171..2532971(+) (recX) [Metabacillus sp. KUDC1714]
MAIITKITAQKHSEDRLNIFLDDGTGEKYAFSVDQDVFIKYNLQKGKELDEFDINEIQFGDEIKKAYNKALEFLSYRMRS
IKEVEDHLQKKEYNDAIIQEVIFKLKEYRYVDDLEFALAYVRTQWQTNGKGPSVIKREMAGKGIEQAFIEQALIQYTQAA
QIEEAVNHAEKVLKKNNKLSSVQLKQKLEQHLMRKGFSYDIISIALEEVNVEQEESEEWAALLKHAEKAKKKYQNEDSYH
YKLKMKQFLFRKGFSVEIIDQYLDEE

Nucleotide


Download         Length: 801 bp        

>NTDB_id=457307 HUW50_RS11975 WP_185653945.1 2532171..2532971(+) (recX) [Metabacillus sp. KUDC1714]
ATGGCTATTATTACAAAAATCACTGCGCAAAAGCATTCTGAAGATCGATTAAATATTTTTTTAGATGATGGAACGGGAGA
AAAATATGCTTTTAGTGTAGATCAAGATGTGTTTATTAAATACAATCTTCAAAAAGGAAAAGAACTTGATGAATTTGATA
TTAATGAAATCCAATTTGGTGATGAAATTAAAAAGGCATATAATAAAGCTTTAGAATTTTTAAGTTATCGGATGCGCTCT
ATAAAAGAAGTGGAGGATCACTTACAAAAAAAGGAATATAACGATGCGATTATTCAAGAGGTCATATTTAAGCTTAAGGA
ATATCGCTATGTTGATGATCTTGAATTTGCTTTAGCTTATGTCAGAACACAGTGGCAAACGAATGGAAAAGGGCCAAGTG
TGATAAAGCGAGAGATGGCAGGTAAAGGAATCGAACAAGCATTTATCGAACAAGCCCTTATTCAATATACGCAAGCTGCT
CAAATTGAAGAGGCAGTTAACCATGCTGAAAAGGTATTGAAAAAAAATAATAAGCTATCTAGTGTGCAGCTAAAGCAAAA
ATTAGAGCAGCATCTGATGAGGAAGGGCTTTTCTTATGATATTATTTCAATTGCATTAGAAGAAGTGAATGTAGAGCAGG
AAGAATCAGAGGAATGGGCTGCATTACTAAAACACGCAGAAAAGGCTAAAAAGAAATACCAAAATGAGGATTCATATCAC
TATAAACTAAAGATGAAACAATTTTTATTTCGTAAAGGGTTTTCCGTTGAAATCATTGATCAATATTTAGACGAAGAATA
A

Domains


Predicted by InterproScan.

(88-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

55.639

100

0.556