Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | C663_RS03920 | Genome accession | NC_020244 |
| Coordinates | 768208..769338 (+) | Length | 376 a.a. |
| NCBI ID | WP_041517742.1 | Uniprot ID | - |
| Organism | Bacillus subtilis XF-1 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 763208..774338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C663_RS03900 (C663_0707) | yeeF | 763299..765308 (-) | 2010 | WP_041517740.1 | LXG family T7SS effector deoxyribonuclease toxin YeeF | - |
| C663_RS03905 | - | 765475..765813 (+) | 339 | WP_015482912.1 | hypothetical protein | - |
| C663_RS03910 (C663_0708) | - | 765826..766746 (+) | 921 | WP_015383026.1 | DUF5655 domain-containing protein | - |
| C663_RS03915 (C663_0709) | - | 766902..768062 (+) | 1161 | WP_015482913.1 | lysozyme inhibitor LprI family protein | - |
| C663_RS03920 (C663_0710) | rapC | 768208..769338 (+) | 1131 | WP_041517742.1 | response regulator aspartate phosphatase RapH | Regulator |
| C663_RS03925 | phrH | 769328..769501 (+) | 174 | WP_015482915.1 | phosphatase RapH inhibitor PhrH | - |
| C663_RS03930 (C663_0711) | yeeI | 769661..770380 (+) | 720 | WP_003242611.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| C663_RS03935 | yeeK | 770514..770981 (+) | 468 | WP_015482916.1 | spore coat protein YeeK | - |
| C663_RS03940 (C663_0713) | yezE | 771095..771679 (+) | 585 | WP_015482917.1 | TetR/AcrR family transcriptional regulator | - |
| C663_RS03945 (C663_0714) | yesE | 771758..772204 (+) | 447 | WP_015383031.1 | nuclear transport factor 2 family protein | - |
| C663_RS03950 (C663_0715) | yesF | 772201..773066 (+) | 866 | Protein_756 | SDR family oxidoreductase | - |
| C663_RS03955 (C663_0716) | cotJA | 773193..773441 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| C663_RS03960 (C663_0717) | cotJB | 773425..773688 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| C663_RS03965 (C663_0718) | cotJC | 773703..774272 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 43785.00 Da Isoelectric Point: 5.7351
>NTDB_id=45727 C663_RS03920 WP_041517742.1 768208..769338(+) (rapC) [Bacillus subtilis XF-1]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIENPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPVVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HVLQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACAGSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLETIENPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPVVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HVLQALDIYQNNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALKLATDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACAGSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=45727 C663_RS03920 WP_041517742.1 768208..769338(+) (rapC) [Bacillus subtilis XF-1]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTACTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGAACCCGCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGGTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATGTTCTTCAAGCCTTGGACATTTATCAAAACAATCCCCTATACAGCATTAGAACCATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTTTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCGGGAGTGCTGCCGCTGTGTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTTGAGCAGGACATTCAGCAGATGGAAGAAGACCAGGATTTACTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGAACCCGCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGGTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATGTTCTTCAAGCCTTGGACATTTATCAAAACAATCCCCTATACAGCATTAGAACCATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTCAAATTGGCAACGGACATTC
AAAACGATCGGTTTATCGCCATTTCTTTATTGAACATTGCAAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGGTTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCGTACATTGAAGCATGTGCCGGGAGTGCTGCCGCTGTGTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.16 |
100 |
0.402 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.523 |
100 |
0.396 |