Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C663_RS00225 Genome accession   NC_020244
Coordinates   42903..43730 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis XF-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 37903..48730
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C663_RS00200 (C663_0028) yaaO 38966..40408 (+) 1443 WP_015382555.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  C663_RS00205 (C663_0029) tmk 40405..41043 (+) 639 WP_003243137.1 dTMP kinase -
  C663_RS00210 (C663_0030) darA 41117..41446 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  C663_RS00215 (C663_0031) yaaR 41459..41899 (+) 441 WP_015382556.1 YaaR family protein -
  C663_RS00220 (C663_0032) holB 41911..42900 (+) 990 WP_015382557.1 DNA polymerase III subunit delta' -
  C663_RS00225 (C663_0033) yaaT 42903..43730 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  C663_RS00230 (C663_0034) yabA 43745..44104 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  C663_RS00235 (C663_0035) trmNF 44163..44906 (+) 744 WP_015382558.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C663_RS00240 (C663_0036) yazA 44893..45192 (+) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  C663_RS00245 (C663_0037) rsmI 45167..46045 (+) 879 WP_041517603.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C663_RS00250 (C663_0038) abrB 46094..46384 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=45705 C663_RS00225 WP_003226767.1 42903..43730(+) (yaaT) [Bacillus subtilis XF-1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=45705 C663_RS00225 WP_003226767.1 42903..43730(+) (yaaT) [Bacillus subtilis XF-1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTCAGAGAGCTTGTAAAGGATTTGG
CATCTATCTTTAAGACAAGGATTGAGCTGCGCCAAATAGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996