Detailed information NTG0456521

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: HUW56_RS11075
• Genome accession: NZ_CP055160
• Coordinates: 2324762..2325907 (+)
• Length: 381 a.a.
• NCBI ID: WP_074534220.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain WLYS23
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2319762..2330907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUW56_RS11055 (HUW56_11055)	-	2320659..2321087 (-)	429	WP_032869448.1	DUF1934 domain-containing protein	-
HUW56_RS11060 (HUW56_11060)	-	2321241..2321753 (+)	513	Protein_2196	bacteriocin biosynthesis protein AlbG	-
HUW56_RS11065 (HUW56_11065)	-	2321760..2323136 (-)	1377	WP_032875890.1	YncE family protein	-
HUW56_RS11070 (HUW56_11070)	-	2323176..2324531 (-)	1356	WP_032875887.1	YncE family protein	-
HUW56_RS11075 (HUW56_11075)	rapF	2324762..2325907 (+)	1146	WP_074534220.1	Rap family tetratricopeptide repeat protein	Regulator
HUW56_RS11080 (HUW56_11080)	-	2325891..2326010 (+)	120	WP_017418707.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
HUW56_RS11085 (HUW56_11085)	speB	2326133..2327005 (-)	873	WP_032875884.1	agmatinase	-
HUW56_RS11090 (HUW56_11090)	speE	2327064..2327894 (-)	831	WP_003151052.1	spermidine synthase	-
HUW56_RS11095 (HUW56_11095)	-	2328094..2330166 (+)	2073	WP_032875881.1	transglycosylase domain-containing protein	-
HUW56_RS11100 (HUW56_11100)	-	2330191..2330624 (-)	434	Protein_2204	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45737.21 Da
• Isoelectric Point: 5.0614

>NTDB_id=456521 HUW56_RS11075 WP_074534220.1 2324762..2325907(+) (rapF) [Bacillus velezensis strain WLYS23]
MASVLSSSAVGEKINEWYMYIRRFSIPDAEYLRREIKEELAGLEDDQDLHLYYSLMEFRHNLMLEYLEPLESQRIEEQPR
LSDLLADIDKKQARLTGRLDYYFNFFRGMYELECREYLSAIQFFKKAESKLTYVKDHIEKAEFYFKMSEVYYYMKQTYVS
MDYARQAYLIYKDAEKYNIRLTQCHSLFGANYLDVKQYDHAISHFQKAYTMAELEQQPQLMGRTLFNIALCHNNQNNKVE
AIPHLKEAIAVFEKAQMSHSLPQPYFLLTQIYFKLKNIDNAYDYHKKGISICKEIDDIIYEEKFKFLEYLYMPDPRDTLI
NDCLHFLENKLMYADIEELALDVAKYYYTQEEYKKASVYFLKVEEARQQIEGGVNLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=456521 HUW56_RS11075 WP_074534220.1 2324762..2325907(+) (rapF) [Bacillus velezensis strain WLYS23]
GTGGCGAGTGTTTTATCATCTTCAGCGGTTGGAGAAAAAATCAACGAATGGTATATGTACATTCGAAGGTTCAGCATCCC
GGACGCCGAGTACTTGCGGAGAGAAATCAAAGAAGAACTTGCAGGTCTGGAAGATGATCAGGATCTTCATCTATACTATT
CTCTCATGGAATTCCGTCACAATCTGATGCTCGAATACCTCGAACCGCTGGAATCGCAGCGGATAGAAGAACAGCCGAGA
CTATCGGATCTGCTCGCGGATATTGATAAAAAGCAGGCCCGGCTGACCGGACGTCTTGATTATTATTTTAATTTTTTCCG
GGGGATGTATGAGCTGGAATGCCGTGAATATCTTTCAGCGATTCAGTTTTTTAAGAAAGCTGAAAGCAAACTGACGTACG
TTAAAGATCATATAGAAAAAGCTGAATTTTACTTTAAAATGTCAGAAGTCTATTATTATATGAAACAAACTTATGTATCG
ATGGATTATGCGCGGCAGGCTTATTTAATTTATAAAGATGCAGAAAAATATAATATTAGATTAACCCAGTGCCATTCTTT
ATTTGGGGCTAATTATCTTGATGTAAAGCAATACGATCACGCGATTTCCCACTTTCAAAAGGCATATACGATGGCTGAAT
TGGAGCAGCAGCCGCAATTAATGGGGAGGACACTTTTTAACATCGCTTTATGCCATAATAATCAAAACAATAAAGTCGAG
GCTATTCCCCATTTAAAAGAAGCCATAGCTGTTTTTGAAAAAGCTCAAATGAGTCATTCACTTCCGCAGCCCTACTTCTT
ACTTACACAGATTTATTTTAAGTTAAAAAATATAGATAACGCGTACGATTATCATAAAAAAGGTATCTCAATATGTAAGG
AAATAGATGATATAATTTACGAGGAAAAATTTAAATTTTTAGAATACTTGTATATGCCGGATCCAAGAGATACATTAATA
AACGATTGTCTGCATTTTCTTGAAAATAAATTGATGTATGCTGATATTGAGGAATTAGCCCTTGATGTAGCTAAATATTA
TTACACACAAGAAGAATATAAAAAAGCTTCTGTCTACTTTTTAAAGGTTGAAGAAGCCAGACAGCAGATCGAAGGAGGAG
TGAATTTATATGAAATTGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (188-254)

• Tetratricopeptide repeat (TPR_8) (265-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	70.079	100	0.701
rapC	Bacillus subtilis subsp. subtilis str. 168	54.211	99.738	0.541