Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   JEK78_RS22575 Genome accession   NZ_CP066801
Coordinates   5187870..5188643 (+) Length   257 a.a.
NCBI ID   WP_242483189.1    Uniprot ID   -
Organism   Streptomyces sp. HSG2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5182870..5193643
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEK78_RS22550 - 5182970..5183944 (-) 975 WP_200262004.1 NADPH:quinone reductase -
  JEK78_RS22555 - 5184466..5185338 (+) 873 WP_200262005.1 isopenicillin N synthase family oxygenase -
  JEK78_RS22560 - 5185678..5186076 (-) 399 WP_200262006.1 hypothetical protein -
  JEK78_RS22565 - 5186073..5186222 (-) 150 Protein_4458 IS5/IS1182 family transposase -
  JEK78_RS22570 - 5186294..5187495 (+) 1202 WP_200259843.1 IS3 family transposase -
  JEK78_RS22575 uvrA 5187870..5188643 (+) 774 WP_242483189.1 hypothetical protein Machinery gene
  JEK78_RS22580 - 5188720..5189367 (+) 648 WP_200262007.1 PadR family transcriptional regulator -
  JEK78_RS22585 - 5189427..5190389 (+) 963 WP_200262008.1 ATP-binding cassette domain-containing protein -
  JEK78_RS22590 - 5190399..5191154 (+) 756 WP_200262009.1 ABC transporter permease -
  JEK78_RS22595 - 5191600..5192115 (+) 516 WP_200262010.1 hypothetical protein -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 27155.67 Da        Isoelectric Point: 4.6062

>NTDB_id=456401 JEK78_RS22575 WP_242483189.1 5187870..5188643(+) (uvrA) [Streptomyces sp. HSG2]
MDQEPIGRTPRSNPATYTKAFNLIRNLFAATDAAARRGLTAASFSFNSPGGRCEPCTGYGVRQVDMNFLPDVWVTCDVCE
GRRYGSDVLAVTYQGLAIDEVLDLTVDEATEVLDTPALRPVLTALRQTGLGYLRLGQSSTVLSGGEAQRLKLAAALTKGS
RQPGLVVLDEPVTGLHPADVQVLVDAFDVLLAAGNTVVLAEHDLHLAAAADWLIDMGPGSGEAGGTVLHCGRPDALRPDS
GPTAEYLLRLHSESATT

Nucleotide


Download         Length: 774 bp        

>NTDB_id=456401 JEK78_RS22575 WP_242483189.1 5187870..5188643(+) (uvrA) [Streptomyces sp. HSG2]
GTGGACCAGGAGCCCATCGGCCGGACACCGCGCTCCAACCCGGCCACGTACACCAAGGCCTTCAACCTGATCCGCAACCT
CTTCGCAGCCACCGACGCCGCCGCCCGCCGCGGGCTGACCGCGGCCTCCTTCTCCTTCAACTCGCCGGGTGGCCGCTGTG
AGCCGTGCACCGGGTACGGCGTGCGGCAGGTCGACATGAACTTCCTGCCCGACGTCTGGGTCACCTGCGACGTCTGTGAG
GGCAGGCGGTACGGGTCCGACGTGCTCGCGGTGACCTACCAGGGACTGGCCATCGACGAGGTTCTGGACCTGACCGTCGA
CGAGGCCACCGAGGTCCTCGACACTCCCGCACTGCGGCCGGTGCTCACGGCCCTGCGGCAGACTGGTCTGGGCTATCTGC
GGCTGGGGCAGAGCTCCACAGTGCTCTCGGGCGGTGAGGCACAGCGGCTGAAGCTGGCGGCCGCGCTGACCAAGGGCTCG
CGGCAGCCCGGTCTGGTCGTGCTGGACGAACCGGTCACCGGTCTGCACCCGGCGGATGTCCAGGTTCTCGTCGACGCCTT
CGACGTGCTCCTCGCCGCGGGCAACACCGTTGTACTCGCCGAGCACGACCTGCACCTGGCCGCCGCCGCGGACTGGCTGA
TCGACATGGGGCCAGGCAGCGGAGAGGCCGGGGGCACGGTCCTGCACTGCGGCCGCCCGGACGCCCTGCGACCGGACTCC
GGCCCTACGGCCGAGTATCTGCTGCGGCTCCACTCGGAGTCCGCCACGACTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

49.77

84.436

0.42
  uvrA Streptococcus pneumoniae TIGR4

49.77

84.436

0.42
  uvrA Streptococcus pneumoniae D39

49.77

84.436

0.42