Detailed information NTG0045635

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BPTD_RS17675
• Genome accession: NC_017223
• Coordinates: 3724448..3725551 (+)
• Length: 367 a.a.
• NCBI ID: WP_023853086.1
• Uniprot ID: A0AAI9J0F0
• Organism: Bordetella pertussis CS
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3719448..3730551

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPTD_RS17650 (BPTD_3420)	-	3721325..3721711 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
BPTD_RS17655 (BPTD_3421)	-	3721719..3722852 (-)	1134	WP_010931494.1	benzoate/H(+) symporter BenE family transporter	-
BPTD_RS17660 (BPTD_3422)	-	3722916..3723167 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BPTD_RS17665 (BPTD_3423)	coaD	3723222..3723731 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
BPTD_RS17670 (BPTD_3424)	rsmD	3723752..3724372 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BPTD_RS17675 (BPTD_3425)	pilA	3724448..3725551 (+)	1104	WP_023853086.1	signal recognition particle-docking protein FtsY	Machinery gene
BPTD_RS17680 (BPTD_3426)	-	3725598..3727196 (-)	1599	Protein_3500	CYTH and CHAD domain-containing protein	-
BPTD_RS17690 (BPTD_3427)	phnE	3727379..3728200 (-)	822	WP_010931496.1	phosphonate ABC transporter, permease protein PhnE	-
BPTD_RS17695 (BPTD_3428)	phnE	3728197..3729066 (-)	870	WP_023998122.1	phosphonate ABC transporter, permease protein PhnE	-
BPTD_RS17700	-	3729084..3729569 (-)	486	Protein_3503	phosphonate ABC transporter ATP-binding protein	-
BPTD_RS17705 (BPTD_3430)	-	3729563..3730513 (-)	951	WP_005013747.1	IS481-like element IS481 family transposase	-

Sequence

Protein

• Length: 367 a.a.
• Molecular weight: 38499.02 Da
• Isoelectric Point: 6.5148

>NTDB_id=45635 BPTD_RS17675 WP_023853086.1 3724448..3725551(+) (pilA) [Bordetella pertussis CS]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPEPQPQQPPEPQPPVAAAPEAPRKASWLSRLKQGLSRTG
QNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRA
QPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGR
ARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTA
KGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1104 bp

>NTDB_id=45635 BPTD_RS17675 WP_023853086.1 3724448..3725551(+) (pilA) [Bordetella pertussis CS]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGCAGC
CACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGC
CAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGC
CGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGG
CGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCC
CAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCA
GCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCA
GCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGT
GCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAA
GATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGA
ACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCC
AAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGA
GGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (163-365)

• SRP54-type protein, helical bundle domain (SRP54_N) (83-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.913	94.005	0.507