Detailed information NTG0456010

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: JG535_RS05535
• Genome accession: NZ_CP066746
• Coordinates: 1085179..1086138 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain CJP19-D445 isolate CFSAN091031
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1080179..1091138

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JG535_RS05510 (JG535_05510)	neuB	1080678..1081718 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
JG535_RS05515 (JG535_05515)	neuC	1081715..1082833 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
JG535_RS05520 (JG535_05520)	-	1082830..1083495 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
JG535_RS05525 (JG535_05525)	-	1083483..1084316 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
JG535_RS05530 (JG535_05530)	waaV	1084308..1085120 (-)	813	WP_002856066.1	glycosyltransferase family 2 protein	-
JG535_RS05535 (JG535_05535)	waaF	1085179..1086138 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
JG535_RS05540 (JG535_05540)	gmhA	1086119..1086679 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
JG535_RS05545 (JG535_05545)	rfaE1	1086676..1088070 (-)	1395	WP_032581686.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
JG535_RS05550 (JG535_05550)	rfaD	1088063..1089016 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
JG535_RS05555 (JG535_05555)	gmhB	1089017..1089577 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
JG535_RS05560 (JG535_05560)	-	1089659..1089961 (+)	303	WP_002852762.1	cytochrome c	-
JG535_RS05565 (JG535_05565)	ccoS	1089984..1090190 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=456010 JG535_RS05535 WP_002856368.1 1085179..1086138(+) (waaF) [Campylobacter jejuni strain CJP19-D445 isolate CFSAN091031]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=456010 JG535_RS05535 WP_002856368.1 1085179..1086138(+) (waaF) [Campylobacter jejuni strain CJP19-D445 isolate CFSAN091031]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956