Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CT43_RS06050 Genome accession   NC_017208
Coordinates   1207695..1208378 (+) Length   227 a.a.
NCBI ID   WP_000350715.1    Uniprot ID   A0AAN4HLX4
Organism   Bacillus thuringiensis serovar chinensis CT-43     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1202695..1213378
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CT43_RS06030 (CT43_CH1122) - 1203760..1205406 (+) 1647 WP_000727243.1 peptide ABC transporter substrate-binding protein -
  CT43_RS06035 (CT43_CH1123) - 1205434..1205637 (-) 204 WP_000559971.1 hypothetical protein -
  CT43_RS34845 - 1205564..1205764 (+) 201 WP_080546091.1 dithiol-disulfide isomerase -
  CT43_RS06040 (CT43_CH1124) spx 1206230..1206625 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  CT43_RS06045 (CT43_CH1125) - 1206675..1207349 (-) 675 WP_000362612.1 TerC family protein -
  CT43_RS06050 (CT43_CH1126) mecA 1207695..1208378 (+) 684 WP_000350715.1 adaptor protein MecA Regulator
  CT43_RS06055 (CT43_CH1127) - 1208451..1209995 (+) 1545 WP_000799191.1 cardiolipin synthase -
  CT43_RS06060 (CT43_CH1128) - 1210076..1211320 (+) 1245 WP_000612280.1 competence protein CoiA -
  CT43_RS06065 (CT43_CH1129) pepF 1211371..1213197 (+) 1827 WP_000003352.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=45546 CT43_RS06050 WP_000350715.1 1207695..1208378(+) (mecA) [Bacillus thuringiensis serovar chinensis CT-43]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=45546 CT43_RS06050 WP_000350715.1 1207695..1208378(+) (mecA) [Bacillus thuringiensis serovar chinensis CT-43]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATCCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGATGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATTGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559

Multiple sequence alignment