Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CT43_RS05965 Genome accession   NC_017208
Coordinates   1189559..1189735 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis serovar chinensis CT-43     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1184559..1194735
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CT43_RS05945 (CT43_CH1104) clpC 1184890..1187490 (+) 2601 WP_000365411.1 ATP-dependent chaperone ClpB Regulator
  CT43_RS05950 (CT43_CH1105) - 1187529..1187711 (-) 183 WP_001211116.1 YjzD family protein -
  CT43_RS05955 (CT43_CH1106) - 1187868..1188602 (+) 735 WP_000028688.1 hydrolase -
  CT43_RS05960 (CT43_CH1107) - 1188632..1189504 (+) 873 WP_000487723.1 NAD(P)-dependent oxidoreductase -
  CT43_RS05965 (CT43_CH1108) comZ 1189559..1189735 (+) 177 WP_001986215.1 ComZ family protein Regulator
  CT43_RS05970 (CT43_CH1110) fabH 1189967..1190899 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  CT43_RS05975 (CT43_CH1111) fabF 1190931..1192169 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  CT43_RS05980 (CT43_CH1112) - 1192276..1193064 (+) 789 WP_000513281.1 DUF2268 domain-containing protein -
  CT43_RS05985 (CT43_CH1113) - 1193209..1193955 (+) 747 WP_000966129.1 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=45543 CT43_RS05965 WP_001986215.1 1189559..1189735(+) (comZ) [Bacillus thuringiensis serovar chinensis CT-43]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=45543 CT43_RS05965 WP_001986215.1 1189559..1189735(+) (comZ) [Bacillus thuringiensis serovar chinensis CT-43]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAAGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTATGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment