Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HUT07_RS04135 Genome accession   NZ_CP054931
Coordinates   944611..945012 (+) Length   133 a.a.
NCBI ID   WP_005418455.1    Uniprot ID   -
Organism   Stenotrophomonas sp. NA06056     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 939611..950012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUT07_RS04120 (HUT07_04120) tsaB 941285..941998 (+) 714 WP_176019863.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  HUT07_RS04125 (HUT07_04125) - 942540..943424 (-) 885 WP_100553284.1 energy transducer TonB -
  HUT07_RS04130 (HUT07_04130) gshB 943424..944371 (-) 948 WP_176019864.1 glutathione synthase -
  HUT07_RS04135 (HUT07_04135) pilG 944611..945012 (+) 402 WP_005418455.1 twitching motility response regulator PilG Regulator
  HUT07_RS04140 (HUT07_04140) - 945031..945393 (+) 363 WP_108756949.1 response regulator -
  HUT07_RS04145 (HUT07_04145) - 945393..945923 (+) 531 WP_025877750.1 chemotaxis protein CheW -
  HUT07_RS04150 (HUT07_04150) - 945965..948001 (+) 2037 WP_176019865.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14657.98 Da        Isoelectric Point: 6.3483

>NTDB_id=455391 HUT07_RS04135 WP_005418455.1 944611..945012(+) (pilG) [Stenotrophomonas sp. NA06056]
MTENTTAGGELAGLRVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKATPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRTYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=455391 HUT07_RS04135 WP_005418455.1 944611..945012(+) (pilG) [Stenotrophomonas sp. NA06056]
ATGACTGAAAACACGACTGCGGGCGGGGAGCTCGCAGGACTCCGGGTGATGGTCATCGATGACTCGAAGACCATCCGCAG
GACTGCGGAAACACTGCTGAAGCGCGAAGGCTGCGAAGTGGTGACCGCGACGGACGGTTTCGAGGCCTTGGCCAAGATCG
CCGACCAGCAGCCGCAGATCATCTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGATCAAG
GGCAACCAGCTGTTCAAGGCGACCCCGGTGATCATGCTGTCATCCAAGGATGGCCTGTTCGACAAAGCGCGGGGGCGCAT
CGTCGGCTCGGAGCAATACCTGACCAAGCCATTCACGCGCGAAGAACTGCTGGGTGCCATCCGCACGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.38

90.977

0.677