Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BSNT_RS23180 Genome accession   NC_017196
Coordinates   387469..387609 (+) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. natto BEST195     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 382469..392609
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSNT_RS23175 srfAB 384333..387425 (+) 3093 Protein_349 surfactin non-ribosomal peptide synthetase SrfAB -
  BSNT_RS23180 comS 387469..387609 (+) 141 WP_225910706.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=45531 BSNT_RS23180 WP_225910706.1 387469..387609(+) (comS) [Bacillus subtilis subsp. natto BEST195]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=45531 BSNT_RS23180 WP_225910706.1 387469..387609(+) (comS) [Bacillus subtilis subsp. natto BEST195]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment