Detailed information NTG0045526

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSNT_RS19925
• Genome accession: NC_017196
• Coordinates: 3717701..3718846 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto BEST195
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3712701..3723846

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSNT_RS19900 (BSNT_05722)	albF	3712717..3713997 (+)	1281	WP_014481221.1	pitrilysin family protein	-
BSNT_RS19905 (BSNT_05724)	albG	3713994..3714695 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BSNT_RS19910 (BSNT_05725)	ywhL	3714701..3716077 (-)	1377	WP_014481223.1	YncE family protein	-
BSNT_RS19915 (BSNT_05726)	ywhK	3716116..3717471 (-)	1356	WP_014481224.1	YncE family protein	-
BSNT_RS23635	-	3717468..3717698 (-)	231	Protein_3869	hypothetical protein	-
BSNT_RS19925 (BSNT_05729)	rapF	3717701..3718846 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
BSNT_RS19930	phrF	3718830..3718949 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
BSNT_RS19935	-	3719047..3719474 (+)	428	Protein_3872	YbaK/EbsC family protein	-
BSNT_RS19940 (BSNT_05732)	speB	3719539..3720411 (-)	873	WP_003227545.1	agmatinase	-
BSNT_RS19945 (BSNT_05733)	speE	3720472..3721302 (-)	831	WP_003227543.1	spermidine synthase	-
BSNT_RS19950 (BSNT_05736)	pbpG	3721504..3723579 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=45526 BSNT_RS19925 WP_014481226.1 3717701..3718846(+) (rapF) [Bacillus subtilis subsp. natto BEST195]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=45526 BSNT_RS19925 WP_014481226.1 3717701..3718846(+) (rapF) [Bacillus subtilis subsp. natto BEST195]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572