Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   HUW54_RS10360 Genome accession   NZ_CP054876
Coordinates   2081144..2081860 (+) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain Dresden-275757     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2076144..2086860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUW54_RS10330 (HUW54_10330) - 2076359..2076985 (+) 627 WP_000522384.1 nitroreductase family protein -
  HUW54_RS10335 (HUW54_10335) - 2077346..2078131 (+) 786 WP_000867949.1 carbon-nitrogen family hydrolase -
  HUW54_RS14145 (HUW54_10340) - 2078731..2078865 (-) 135 WP_001549197.1 delta-lysin family phenol-soluble modulin -
  HUW54_RS10345 (HUW54_10345) - 2079101..2079664 (+) 564 WP_001105705.1 accessory gene regulator AgrB -
  HUW54_RS10350 (HUW54_10350) - 2079668..2079808 (+) 141 WP_000735197.1 cyclic lactone autoinducer peptide -
  HUW54_RS10355 (HUW54_10355) - 2079833..2081125 (+) 1293 WP_000387809.1 GHKL domain-containing protein -
  HUW54_RS10360 (HUW54_10360) agrA 2081144..2081860 (+) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  HUW54_RS10365 (HUW54_10365) - 2081932..2082041 (+) 110 Protein_2015 hypothetical protein -
  HUW54_RS10370 (HUW54_10370) - 2082229..2083188 (-) 960 WP_001253314.1 carbohydrate kinase -
  HUW54_RS10375 (HUW54_10375) - 2083185..2084669 (-) 1485 WP_000141429.1 sucrose-6-phosphate hydrolase -
  HUW54_RS10380 (HUW54_10380) - 2084818..2085768 (-) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=455233 HUW54_RS10360 WP_000688492.1 2081144..2081860(+) (agrA) [Staphylococcus aureus strain Dresden-275757]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=455233 HUW54_RS10360 WP_000688492.1 2081144..2081860(+) (agrA) [Staphylococcus aureus strain Dresden-275757]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1