Detailed information NTG0455198

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: HUW54_RS00175
• Genome accession: NZ_CP054876
• Coordinates: 43985..45334 (-)
• Length: 449 a.a.
• NCBI ID: WP_175528685.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain Dresden-275757
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
SCCmec	43985..45334	43985..45334	within	0

Gene organization within MGE regions

Location: 43985..45334

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUW54_RS00175 (HUW54_00175)	ccrA	43985..45334 (-)	1350	WP_175528685.1	recombinase family protein	Machinery gene

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52489.10 Da
• Isoelectric Point: 10.0411

>NTDB_id=455198 HUW54_RS00175 WP_175528685.1 43985..45334(-) (ccrA) [Staphylococcus aureus strain Dresden-275757]
MKQAIGYLRQSTTKQQSLAAQKQTIEALAKKHNITYITFYSDKQSGRTDKRNGYQQITELIQQGQCNVLCCYRLNRLHRN
LKNALKLMKLCQKYHIHILSVHDGYFDMDKAFDRLKLNIFISLAELESDNIGEQVKNGIKEKARQGKLITTHAPFGYHYH
NGTFTIDTVKSPTVKAVFNYYLQGYGYKKIAQYLEADDKFINRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI
YEEAQVTRTQKQVKRKPSENQLKQKIKCPYCHSTLTNMTVRKPNHSLRYYVCPKNMNNARFVCEFKGINAQELETSVLAT
CQDFFQNQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLIEKLAQGKIDADTFREQSQSFRQQSNPITSINAHQIRKVFQ
NIIQQRFTLNMLYPYIDEIHITKNKTLTGIYFKNEPLNIVNQTAQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=455198 HUW54_RS00175 WP_175528685.1 43985..45334(-) (ccrA) [Staphylococcus aureus strain Dresden-275757]
ATGAAACAAGCAATAGGTTACTTACGACAGAGCACTACAAAGCAACAATCCCTAGCAGCACAAAAACAAACCATAGAGGC
ATTAGCCAAAAAACATAATATTACATACATTACCTTTTATAGCGATAAGCAATCAGGACGTACTGATAAGCGGAATGGTT
ATCAACAAATTACTGAACTGATTCAACAAGGACAATGTAACGTATTATGTTGTTACAGATTAAACCGACTTCATCGCAAT
CTTAAAAATGCATTAAAACTCATGAAATTGTGTCAAAAATACCATATCCATATCTTAAGCGTTCATGATGGCTACTTCGA
CATGGATAAAGCATTCGATCGGCTCAAACTCAATATTTTCATCAGCTTGGCCGAACTAGAATCTGATAATATAGGCGAAC
AAGTCAAAAATGGAATCAAAGAAAAAGCGAGACAAGGTAAACTAATTACAACACATGCACCCTTTGGGTATCACTATCAT
AATGGTACTTTCACAATAGACACAGTAAAATCACCAACAGTAAAAGCTGTGTTCAATTATTACCTTCAAGGTTATGGTTA
TAAAAAAATTGCGCAATACTTAGAAGCTGATGATAAATTCATTAATCGCAAGCCCTATCAAGTGCGTAATATTATCCTTA
ACCCTAATTACTGTGGCCGTGTTATCAATCAATACGGACAATATGAAAACATGTTCCCAGCTATTGTCAGTACAACGATA
TACGAAGAAGCTCAAGTTACCCGAACTCAGAAACAAGTCAAACGTAAGCCGTCAGAAAATCAACTCAAACAAAAAATCAA
ATGTCCCTATTGCCATTCGACACTCACAAACATGACCGTCCGAAAACCAAATCATTCATTGCGTTACTATGTCTGTCCGA
AAAATATGAATAACGCTCGCTTTGTTTGTGAATTTAAAGGAATCAACGCACAAGAATTAGAAACAAGTGTTTTAGCGACT
TGTCAGGACTTCTTTCAAAATCAACAGCTCTATTCAAAAATAAATCATACTATTCAACAACGACTCAAAAGACAAAGAGA
TATAGAAACTAAAACTACACTCAATCACGAGCAGCTGATAGAAAAATTAGCCCAAGGCAAAATTGATGCAGATACGTTCA
GAGAACAATCGCAATCATTTCGACAACAGTCAAACCCTATAACATCAATCAATGCACATCAAATTCGAAAGGTTTTTCAA
AATATCATACAACAACGTTTCACGTTAAACATGTTGTACCCTTACATTGATGAAATTCATATTACCAAAAATAAAACACT
TACGGGTATCTATTTCAAAAATGAGCCCTTAAACATCGTCAATCAAACGGCGCAATCATCGATTGCTTAA

Domains

Predicted by InterproScan.

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-322)

• Recombinase (Recombinase) (170-249)

• Resolvase, N terminal domain (Resolvase) (4-147)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	92.428	100	0.924
ccrA	Staphylococcus aureus N315	75.724	100	0.757