Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   JEQ25_RS21540 Genome accession   NZ_CP066380
Coordinates   4116670..4117464 (-) Length   264 a.a.
NCBI ID   WP_046381476.1    Uniprot ID   -
Organism   Bacillus subtilis strain ID-A05     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4111670..4122464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JEQ25_RS21515 (JEQ25_21360) - 4112787..4113470 (-) 684 WP_038428106.1 response regulator transcription factor -
  JEQ25_RS21520 (JEQ25_21365) - 4113682..4114581 (+) 900 WP_046381473.1 PepSY domain-containing protein -
  JEQ25_RS21525 (JEQ25_21370) - 4114742..4115242 (+) 501 WP_046381474.1 PepSY domain-containing protein -
  JEQ25_RS21530 (JEQ25_21375) - 4115239..4115365 (-) 127 Protein_4187 hypothetical protein -
  JEQ25_RS21535 (JEQ25_21380) htrA 4115386..4116588 (-) 1203 WP_046381475.1 serine protease HtrC Regulator
  JEQ25_RS21540 (JEQ25_21385) vicX 4116670..4117464 (-) 795 WP_046381476.1 MBL fold metallo-hydrolase Regulator
  JEQ25_RS21545 (JEQ25_21390) walI 4117486..4118328 (-) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  JEQ25_RS21550 (JEQ25_21395) walH 4118315..4119682 (-) 1368 WP_042976993.1 WalRK two-component regulatory system regulator WalH -
  JEQ25_RS21555 (JEQ25_21400) walK 4119672..4121507 (-) 1836 WP_024572714.1 cell wall metabolism sensor histidine kinase WalK -
  JEQ25_RS21560 (JEQ25_21405) walR 4121515..4122222 (-) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29315.34 Da        Isoelectric Point: 5.8036

>NTDB_id=454947 JEQ25_RS21540 WP_046381476.1 4116670..4117464(-) (vicX) [Bacillus subtilis strain ID-A05]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYNGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFMTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=454947 JEQ25_RS21540 WP_046381476.1 4116670..4117464(-) (vicX) [Bacillus subtilis strain ID-A05]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGGAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AACGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCGATGGAGAC
GGTAAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTCTCCCACGATGCGGCCGAACCGATGTTTTATGTGTTTC
ATTATAACGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGAATGAAAGGCATTATCCGTTCAGCG
AATGTGTTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTATGACGGGTGAGACATTTGACTTATACGACACTGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53