Detailed information NTG0454827

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: JEQ25_RS04125
• Genome accession: NZ_CP066380
• Coordinates: 767706..768833 (-)
• Length: 375 a.a.
• NCBI ID: WP_052728183.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ID-A05
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 762706..773833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEQ25_RS04105 (JEQ25_04060)	-	764668..765270 (+)	603	WP_046380830.1	hypothetical protein	-
JEQ25_RS04110 (JEQ25_04065)	-	765270..767141 (+)	1872	WP_046380831.1	hypothetical protein	-
JEQ25_RS04115 (JEQ25_04070)	-	767242..767400 (-)	159	WP_121509446.1	YgjP-like metallopeptidase domain-containing protein	-
JEQ25_RS04120 (JEQ25_04075)	-	767519..767716 (-)	198	WP_003240078.1	hypothetical protein	-
JEQ25_RS04125 (JEQ25_04080)	rapC	767706..768833 (-)	1128	WP_052728183.1	tetratricopeptide repeat protein	Regulator
JEQ25_RS04130 (JEQ25_04085)	-	769022..769258 (-)	237	Protein_761	hypothetical protein	-
JEQ25_RS04135 (JEQ25_04090)	-	769408..769800 (-)	393	WP_046380833.1	hypothetical protein	-
JEQ25_RS04140 (JEQ25_04095)	-	770133..770603 (-)	471	WP_046380834.1	antitoxin YezG family protein	-
JEQ25_RS04145 (JEQ25_04100)	yeeF	770608..772614 (-)	2007	WP_046380835.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
JEQ25_RS04150 (JEQ25_04105)	-	772781..773119 (+)	339	WP_021481280.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44492.19 Da
• Isoelectric Point: 6.6870

>NTDB_id=454827 JEQ25_RS04125 WP_052728183.1 767706..768833(-) (rapC) [Bacillus subtilis strain ID-A05]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPTEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSIFQFKKSNFNNLTQAYHDLALIYFLQHKQEQAMDCFRKGVRFACKFDDDLFKIMFEGLQTLFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=454827 JEQ25_RS04125 WP_052728183.1 767706..768833(-) (rapC) [Bacillus subtilis strain ID-A05]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCTACTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACAATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTAATAGCAGGTAATTA
CGACGATTTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGAGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATATTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGAACAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGATGATG
ACCTATTTAAAATTATGTTTGAAGGATTGCAGACGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (187-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392