Detailed information NTG0454807

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: JEQ25_RS01635
• Genome accession: NZ_CP066380
• Coordinates: 295352..296473 (+)
• Length: 373 a.a.
• NCBI ID: WP_046380767.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ID-A05
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 290352..301473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JEQ25_RS01610 (JEQ25_01610)	ycdA	290357..291421 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
JEQ25_RS01615 (JEQ25_01615)	-	291444..291575 (-)	132	WP_003246334.1	hypothetical protein	-
JEQ25_RS01620 (JEQ25_01620)	ycdB	291749..293170 (+)	1422	WP_046380765.1	YcdB/YcdC domain-containing protein	-
JEQ25_RS01625 (JEQ25_01625)	ycdC	293357..294718 (+)	1362	WP_046381483.1	YcdB/YcdC domain-containing protein	-
JEQ25_RS01630 (JEQ25_01630)	cwlK	294726..295229 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
JEQ25_RS01635 (JEQ25_01635)	rapF	295352..296473 (+)	1122	WP_046380767.1	response regulator aspartate phosphatase RapJ	Regulator
JEQ25_RS01640 (JEQ25_01640)	ycdF	296580..297356 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
JEQ25_RS01645 (JEQ25_01645)	ycdG	297381..299066 (+)	1686	WP_003234736.1	alpha-glucosidase	-
JEQ25_RS01650 (JEQ25_01650)	znuA	299254..300213 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
JEQ25_RS01655 (JEQ25_01655)	znuC	300269..300964 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44356.17 Da
• Isoelectric Point: 4.8344

>NTDB_id=454807 JEQ25_RS01635 WP_046380767.1 295352..296473(+) (rapF) [Bacillus subtilis strain ID-A05]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDSYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=454807 JEQ25_RS01635 WP_046380767.1 295352..296473(+) (rapF) [Bacillus subtilis strain ID-A05]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACTCGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405