Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | HSZ48_RS06860 | Genome accession | NZ_CP054831 |
| Coordinates | 1366435..1367409 (+) | Length | 324 a.a. |
| NCBI ID | WP_011303021.1 | Uniprot ID | A0A380HM33 |
| Organism | Staphylococcus saprophyticus strain UTI-045 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1361435..1372409
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HSZ48_RS06825 (HSZ48_06850) | rpmG | 1361855..1362004 (+) | 150 | WP_002483181.1 | 50S ribosomal protein L33 | - |
| HSZ48_RS06830 (HSZ48_06855) | - | 1362213..1362758 (+) | 546 | WP_011303016.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| HSZ48_RS06835 (HSZ48_06860) | - | 1362770..1364227 (+) | 1458 | WP_047503908.1 | rhomboid family intramembrane serine protease | - |
| HSZ48_RS06840 (HSZ48_06865) | - | 1364211..1364408 (+) | 198 | WP_037538382.1 | YqgQ family protein | - |
| HSZ48_RS06845 (HSZ48_06870) | - | 1364412..1365398 (+) | 987 | WP_011303019.1 | glucokinase | - |
| HSZ48_RS06850 (HSZ48_06875) | - | 1365398..1365724 (+) | 327 | WP_002483185.1 | MTH1187 family thiamine-binding protein | - |
| HSZ48_RS06855 (HSZ48_06880) | - | 1365724..1366347 (+) | 624 | WP_011303020.1 | MBL fold metallo-hydrolase | - |
| HSZ48_RS06860 (HSZ48_06885) | comGA | 1366435..1367409 (+) | 975 | WP_011303021.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| HSZ48_RS06865 (HSZ48_06890) | comGB | 1367381..1368445 (+) | 1065 | WP_069819600.1 | competence type IV pilus assembly protein ComGB | - |
| HSZ48_RS06870 (HSZ48_06895) | comGC | 1368473..1368784 (+) | 312 | WP_011303023.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| HSZ48_RS06875 (HSZ48_06900) | comGD | 1368765..1369220 (+) | 456 | WP_225791589.1 | competence type IV pilus minor pilin ComGD | - |
| HSZ48_RS06880 (HSZ48_06905) | comGF | 1369478..1369921 (+) | 444 | WP_011303025.1 | competence type IV pilus minor pilin ComGF | - |
| HSZ48_RS06885 (HSZ48_06910) | - | 1370125..1370598 (+) | 474 | WP_002483192.1 | shikimate kinase | - |
| HSZ48_RS06890 (HSZ48_06915) | gcvT | 1370782..1371873 (+) | 1092 | WP_011303027.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 36606.84 Da Isoelectric Point: 9.7041
>NTDB_id=454795 HSZ48_RS06860 WP_011303021.1 1366435..1367409(+) (comGA) [Staphylococcus saprophyticus strain UTI-045]
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
MKLLFNNILKKAISTKATDVHFIPSNDKIYIKFRVQDTLAPIESIQQHIYLKLLTYMKYQAGLDVSKHNVAQSGRYTYKF
KQIYFLRISTLPLSLGIESCVIRIVPQYFQKGSDTSNLGTLYKLMNKKQGLILLSGPTGSGKSTLMYQMVMHAKEQLDLN
IITVEDPVEQLVSGITQVSINEKAGINYANTFKAILRCDPDIILIGEIRDAIIAKQVMHASLSGHLVLTTIHANNCKGAL
LRLKEMGLTMQEMKQALLTVLNQRLITTYNNQRKLVYEQLTKAQINHLIDNDYTLPSSFSNLSTQLTQLAKAGVICEETM
ERYI
Nucleotide
Download Length: 975 bp
>NTDB_id=454795 HSZ48_RS06860 WP_011303021.1 1366435..1367409(+) (comGA) [Staphylococcus saprophyticus strain UTI-045]
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
TTGAAACTTTTATTTAATAATATACTTAAAAAAGCGATTAGTACAAAGGCCACTGATGTGCACTTTATTCCTTCAAATGA
CAAAATATATATTAAATTCAGAGTTCAAGATACGCTTGCACCAATTGAATCCATACAGCAACATATTTATTTGAAATTAT
TAACCTATATGAAATATCAAGCTGGTTTAGATGTGTCTAAACATAATGTTGCTCAAAGTGGTAGATATACTTACAAATTC
AAGCAAATTTACTTTTTAAGAATATCCACGCTACCTTTATCTCTGGGAATAGAAAGTTGTGTTATCAGAATTGTTCCACA
GTATTTTCAAAAAGGAAGTGATACAAGTAATTTAGGTACATTATATAAATTAATGAATAAAAAACAGGGGCTTATATTAT
TAAGTGGACCCACTGGTTCCGGAAAAAGCACTTTAATGTATCAAATGGTCATGCATGCAAAAGAGCAGTTAGATTTAAAT
ATCATAACAGTTGAAGATCCAGTGGAGCAGCTAGTATCTGGAATTACACAAGTATCGATTAATGAAAAAGCAGGTATCAA
TTATGCAAATACTTTTAAAGCGATTTTAAGATGTGATCCTGACATTATTTTGATTGGTGAAATTAGAGATGCCATAATAG
CTAAACAAGTAATGCATGCGAGTCTAAGTGGTCATTTAGTATTAACAACAATTCACGCTAATAACTGTAAAGGCGCATTA
TTAAGGCTTAAAGAAATGGGACTAACGATGCAAGAAATGAAACAAGCTTTATTAACCGTTTTAAACCAAAGACTAATTAC
GACTTATAATAATCAAAGAAAACTTGTATATGAACAACTTACTAAAGCACAAATAAATCATTTAATAGACAATGACTATA
CATTACCTAGTTCATTTTCTAATTTGTCTACTCAATTAACTCAATTAGCCAAAGCAGGTGTTATTTGTGAGGAAACTATG
GAGCGCTATATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
62.037 |
100 |
0.62 |
| comGA | Staphylococcus aureus N315 |
62.037 |
100 |
0.62 |