Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   A7A1_RS17060 Genome accession   NC_019896
Coordinates   3312065..3313195 (-) Length   376 a.a.
NCBI ID   WP_015252625.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. BSP1     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3307065..3318195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7A1_RS17015 (A7A1_1735) cotJC 3307156..3307725 (-) 570 WP_003233850.1 spore coat protein CotJC -
  A7A1_RS17020 (A7A1_1734) cotJB 3307740..3308003 (-) 264 WP_003219491.1 spore coat protein CotJB -
  A7A1_RS17025 (A7A1_1733) cotJA 3307987..3308235 (-) 249 WP_003219489.1 spore coat-associated protein CotJA -
  A7A1_RS17030 (A7A1_1732) yesF 3308361..3309229 (-) 869 Protein_3356 NAD-dependent epimerase/dehydratase family protein -
  A7A1_RS17035 (A7A1_1731) yesE 3309226..3309669 (-) 444 WP_003233857.1 nuclear transport factor 2 family protein -
  A7A1_RS17040 (A7A1_1730) yezE 3309748..3310332 (-) 585 WP_015252623.1 TetR/AcrR family transcriptional regulator -
  A7A1_RS17045 (A7A1_1729) yeeK 3310449..3310889 (-) 441 WP_015252624.1 spore coat protein YeeK -
  A7A1_RS17050 (A7A1_1728) yeeI 3311023..3311742 (-) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  A7A1_RS17055 phrH 3311902..3312075 (-) 174 WP_044052608.1 phosphatase RapH inhibitor PhrH -
  A7A1_RS17060 (A7A1_1727) rapC 3312065..3313195 (-) 1131 WP_015252625.1 response regulator aspartate phosphatase RapH Regulator
  A7A1_RS22030 (A7A1_1726) - 3313341..3313802 (-) 462 WP_015252626.1 lysozyme inhibitor LprI family protein -
  A7A1_RS22035 (A7A1_1725) - 3313802..3314500 (-) 699 WP_015252627.1 hypothetical protein -
  A7A1_RS17070 (A7A1_1724) - 3314702..3315139 (-) 438 WP_015252628.1 hypothetical protein -
  A7A1_RS17075 (A7A1_1723) - 3315352..3316359 (-) 1008 WP_044052609.1 hypothetical protein -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 43934.22 Da        Isoelectric Point: 5.7360

>NTDB_id=45468 A7A1_RS17060 WP_015252625.1 3312065..3313195(-) (rapC) [Bacillus subtilis subsp. subtilis str. BSP1]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEILKAEVEQDIQQMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPVVSDDIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQKNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALDLAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYRELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=45468 A7A1_RS17060 WP_015252625.1 3312065..3313195(-) (rapC) [Bacillus subtilis subsp. subtilis str. BSP1]
TTGAGTCAAGCCATACCGTCTTCGCGTGTAGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGATTCTGAAAGCGGAGGTGGAGCAGGACATTCAGCAAATGGAAGAAGACCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTTCGGCACCAGCTGATGCTTGATTATTTGGAGCCTGGACAAACATACGGAAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGACCAAAAAGAATATGTGGAAGCGATCGGATATTATCGCGAGGCGGAGAAAGAACTGCCGGTTGTGTCAG
ATGATATTGAGAAAGCCGAATTCCATTTTAAAGTGGCAGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAAAAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTAGATTTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ATAAATTTTATAGAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTGTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTTTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.426

100

0.404
  rapF Bacillus subtilis subsp. subtilis str. 168

39.523

100

0.396