Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   IGS65_RS03250 Genome accession   NZ_CP066294
Coordinates   649484..650446 (-) Length   320 a.a.
NCBI ID   WP_002270387.1    Uniprot ID   -
Organism   Streptococcus mutans strain 27-3     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 644484..655446
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS03225 (IGS65_003225) dprA 645287..646129 (-) 843 WP_002303890.1 DNA-processing protein DprA Machinery gene
  IGS65_RS03230 (IGS65_003230) - 646296..646577 (-) 282 WP_002262863.1 hypothetical protein -
  IGS65_RS03235 (IGS65_003235) - 646649..647665 (-) 1017 WP_002265840.1 siderophore ABC transporter substrate-binding protein -
  IGS65_RS03240 (IGS65_003240) - 647758..648519 (-) 762 WP_192072208.1 ATP-binding cassette domain-containing protein -
  IGS65_RS03245 (IGS65_003245) - 648516..649487 (-) 972 WP_192072207.1 iron chelate uptake ABC transporter family permease subunit -
  IGS65_RS03250 (IGS65_003250) ceuB 649484..650446 (-) 963 WP_002270387.1 iron chelate uptake ABC transporter family permease subunit Machinery gene
  IGS65_RS03255 (IGS65_003255) - 650620..651402 (-) 783 WP_002262858.1 ribonuclease HII -
  IGS65_RS03260 (IGS65_003260) ylqF 651389..652240 (-) 852 WP_192072206.1 ribosome biogenesis GTPase YlqF -
  IGS65_RS03265 (IGS65_003265) - 652437..653402 (-) 966 WP_002262856.1 hypothetical protein -
  IGS65_RS03270 (IGS65_003270) - 653688..654026 (-) 339 WP_002262855.1 ATP cone domain-containing protein -
  IGS65_RS03275 (IGS65_003275) dapA 654334..655215 (-) 882 WP_002270384.1 4-hydroxy-tetrahydrodipicolinate synthase -

Sequence

Protein


Download         Length: 320 a.a.        Molecular weight: 34979.24 Da        Isoelectric Point: 9.8764

>NTDB_id=454566 IGS65_RS03250 WP_002270387.1 649484..650446(-) (ceuB) [Streptococcus mutans strain 27-3]
MKKVLTVPVLGAAAVFLSLVSIFIGVKSLSLFELGSLDDSQLNILLSSRIPRTVSILIAGSSLAVCGLIMQQLTQNKFVS
PTTAGTMDWAKLGVVVTIILFSKSSLLLQLIISSVFVIFGSLFFIYLLKVIKFKDDVFIPLVGLMLGKVVSAISTFLGVQ
FQILQSVNSWLEGHFSIMTSHRYEILFLVLPCMVLIYLYAHQFTIAGLGEDFSKNLGLNYQFIINLGLVIVSVMTAIIVT
VVGSLPFLGLIVPNSISAIKGDNMKNNLILTSFLGAVIVLICDIFGRLVIFPYEVSIGLTMGIIGSIFFLYFLMKGRRRS

Nucleotide


Download         Length: 963 bp        

>NTDB_id=454566 IGS65_RS03250 WP_002270387.1 649484..650446(-) (ceuB) [Streptococcus mutans strain 27-3]
ATGAAAAAAGTACTCACTGTTCCAGTGCTGGGTGCAGCTGCAGTCTTTCTTTCTCTCGTTTCAATATTTATCGGTGTTAA
GAGTCTATCGCTTTTTGAACTGGGCTCTTTAGACGATTCACAACTTAACATTTTATTATCTAGTCGCATTCCTAGAACGG
TTAGTATTTTAATTGCTGGCTCTAGTTTAGCCGTTTGTGGTTTAATTATGCAGCAATTAACGCAAAATAAATTTGTCTCA
CCGACAACGGCTGGGACAATGGATTGGGCAAAGCTAGGTGTTGTTGTCACTATTATCTTATTTAGTAAATCTTCTTTACT
ATTGCAGTTGATTATTTCATCGGTCTTTGTCATTTTTGGTTCTTTGTTTTTTATCTATCTTTTAAAGGTTATTAAATTTA
AGGATGATGTTTTCATTCCTCTAGTAGGTCTGATGTTGGGGAAAGTTGTATCTGCAATCAGTACTTTTTTAGGAGTACAG
TTTCAGATATTGCAGTCTGTCAACAGTTGGTTAGAAGGTCATTTTTCCATCATGACTTCTCATCGATATGAGATTTTATT
TTTGGTGCTGCCTTGCATGGTATTAATTTACCTTTATGCTCATCAGTTTACTATAGCTGGCTTGGGAGAAGATTTTTCTA
AAAATCTAGGTTTGAATTATCAATTTATTATTAATTTAGGCTTGGTTATTGTTTCGGTTATGACAGCTATCATTGTAACA
GTTGTTGGCAGTCTTCCTTTTTTAGGTTTGATTGTTCCTAATTCGATTTCTGCTATCAAGGGCGATAATATGAAGAACAA
CTTAATATTAACCTCTTTTTTAGGTGCTGTTATTGTGCTTATTTGTGATATTTTTGGACGTCTTGTTATTTTTCCTTATG
AAGTTTCTATTGGATTGACTATGGGAATAATAGGAAGTATCTTTTTTCTTTATTTTTTGATGAAGGGAAGAAGGCGTTCA
TGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(15-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

46.395

99.688

0.463