Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   IGS65_RS01385 Genome accession   NZ_CP066294
Coordinates   262430..262909 (+) Length   159 a.a.
NCBI ID   WP_002267187.1    Uniprot ID   -
Organism   Streptococcus mutans strain 27-3     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 257430..267909
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IGS65_RS01360 (IGS65_001360) - 257828..258931 (+) 1104 WP_002267744.1 FAD-dependent oxidoreductase -
  IGS65_RS01365 (IGS65_001365) rfbA 258996..259865 (+) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  IGS65_RS01370 (IGS65_001370) - 259867..260463 (+) 597 WP_002267185.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  IGS65_RS01375 (IGS65_001375) - 260526..260699 (+) 174 WP_002263086.1 hypothetical protein -
  IGS65_RS01380 (IGS65_001380) rfbB 261091..262137 (+) 1047 WP_002273831.1 dTDP-glucose 4,6-dehydratase -
  IGS65_RS01385 (IGS65_001385) mutX 262430..262909 (+) 480 WP_002267187.1 8-oxo-dGTP diphosphatase Machinery gene
  IGS65_RS01390 (IGS65_001390) - 262978..264147 (+) 1170 WP_002267188.1 AI-2E family transporter -
  IGS65_RS01395 (IGS65_001395) - 264137..265369 (+) 1233 WP_192072317.1 tetratricopeptide repeat protein -
  IGS65_RS01400 (IGS65_001400) alsS 265502..267181 (+) 1680 WP_192072446.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18916.58 Da        Isoelectric Point: 5.6576

>NTDB_id=454550 IGS65_RS01385 WP_002267187.1 262430..262909(+) (mutX) [Streptococcus mutans strain 27-3]
MTKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILEDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=454550 IGS65_RS01385 WP_002267187.1 262430..262909(+) (mutX) [Streptococcus mutans strain 27-3]
ATGACAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGCAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGAAG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

69.62

99.371

0.692