Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BSNT_RS00240 | Genome accession | NC_017196 |
| Coordinates | 44708..44998 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis subsp. natto BEST195 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39708..49998
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSNT_RS00200 (BSNT_00061) | darA | 39731..40060 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| BSNT_RS00205 (BSNT_00062) | yaaR | 40073..40513 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| BSNT_RS00210 (BSNT_00063) | holB | 40525..41514 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| BSNT_RS00215 (BSNT_00065) | ricT | 41517..42344 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| BSNT_RS00220 (BSNT_00066) | yabA | 42359..42718 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BSNT_RS00225 (BSNT_00068) | trmNF | 42777..43520 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BSNT_RS00230 (BSNT_00069) | yazA | 43507..43806 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BSNT_RS00235 (BSNT_00070) | rsmI | 43781..44659 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BSNT_RS00240 (BSNT_00071) | abrB | 44708..44998 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BSNT_RS00245 (BSNT_00072) | metG | 45493..47487 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| BSNT_RS00250 (BSNT_00073) | dayD | 47567..48334 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| BSNT_RS00255 (BSNT_00075) | yabE | 48490..49803 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=45455 BSNT_RS00240 WP_003226760.1 44708..44998(-) (abrB) [Bacillus subtilis subsp. natto BEST195]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=45455 BSNT_RS00240 WP_003226760.1 44708..44998(-) (abrB) [Bacillus subtilis subsp. natto BEST195]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |