Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HUK64_RS22880 Genome accession   NZ_CP054786
Coordinates   4928498..4928905 (+) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain DL201330     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4923498..4933905
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HUK64_RS22850 (HUK64_22830) - 4923546..4924550 (-) 1005 WP_198580797.1 aspartate carbamoyltransferase catalytic subunit -
  HUK64_RS22855 (HUK64_22835) pyrR 4924574..4925086 (-) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HUK64_RS22860 (HUK64_22840) ruvX 4925198..4925632 (-) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  HUK64_RS22865 (HUK64_22845) - 4925632..4926201 (-) 570 WP_003100947.1 YqgE/AlgH family protein -
  HUK64_RS22870 (HUK64_22850) - 4926250..4927143 (-) 894 WP_015649761.1 energy transducer TonB -
  HUK64_RS22875 (HUK64_22855) gshB 4927290..4928243 (-) 954 WP_003100943.1 glutathione synthase -
  HUK64_RS22880 (HUK64_22860) pilG 4928498..4928905 (+) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HUK64_RS22885 (HUK64_22865) pilH 4928952..4929317 (+) 366 WP_003084587.1 twitching motility response regulator PilH -
  HUK64_RS22890 (HUK64_22870) - 4929368..4929904 (+) 537 WP_003084590.1 chemotaxis protein CheW -
  HUK64_RS22895 (HUK64_22875) pilJ 4929989..4932037 (+) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  HUK64_RS22900 (HUK64_22880) pilK 4932098..4932973 (+) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=454473 HUK64_RS22880 WP_003084583.1 4928498..4928905(+) (pilG) [Pseudomonas aeruginosa strain DL201330]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=454473 HUK64_RS22880 WP_003084583.1 4928498..4928905(+) (pilG) [Pseudomonas aeruginosa strain DL201330]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385