Detailed information NTG0454331

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: IOO20_RS01890
• Genome accession: NZ_CP066241
• Coordinates: 348985..351807 (-)
• Length: 940 a.a.
• NCBI ID: WP_002867761.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain RM1221
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 343985..356807

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IOO20_RS01860	-	344364..345725 (+)	1362	WP_011049664.1	MFS transporter	-
IOO20_RS01865	-	345722..346729 (+)	1008	WP_002867757.1	nucleoside hydrolase	-
IOO20_RS01870	-	346685..347128 (-)	444	WP_002867758.1	YqaA family protein	-
IOO20_RS01875	-	347128..347724 (-)	597	WP_002860300.1	hypothetical protein	-
IOO20_RS01880	-	347705..348412 (-)	708	WP_002867759.1	hypothetical protein	-
IOO20_RS01885	-	348432..348983 (-)	552	WP_002867760.1	hypothetical protein	-
IOO20_RS01890	uvrA	348985..351807 (-)	2823	WP_002867761.1	excinuclease ABC subunit UvrA	Machinery gene
IOO20_RS01895	-	351880..352665 (-)	786	WP_011049666.1	sulfite exporter TauE/SafE family protein	-
IOO20_RS01900	-	352789..352878 (+)	90	WP_042635777.1	hypothetical protein	-
IOO20_RS01905	trpE	353081..354331 (+)	1251	WP_002867763.1	anthranilate synthase component I family protein	-
IOO20_RS01910	trpD	354328..355929 (+)	1602	WP_002867764.1	anthranilate phosphoribosyltransferase	-
IOO20_RS01915	trpF	355916..356515 (+)	600	WP_002858740.1	N-(5'-phosphoribosyl)anthranilate isomerase	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 105487.92 Da
• Isoelectric Point: 8.7066

>NTDB_id=454331 IOO20_RS01890 WP_002867761.1 348985..351807(-) (uvrA) [Campylobacter jejuni strain RM1221]
MNDTIKIIGARENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLSAYARQFLDKVGKPDVDKIEGL
TPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQHCHQCGQKISSMSASDIVSEILKFPKGAKIIIYAPLIREKK
GTYADLLENLRNKGYVRAQIDGVLVRLDEEIELAKTKKHTIKLVIDRLEIQEDLLSRLASDIEKGLQESFGEIEIEVLNH
EEINLNKHYHFSEHSACFDCKISFVPLEPLSFSFNSPKGACEACDGLGIRYTLDMKKIIDENLSLENGAVKIMYGFNKSY
YYKFLIAFCEQNEIPIKIPFMQLNEVQKRLVLYGNAKTIEFLWKRNRLKRTFEGVVKMAYEMLKDEKDLAEYMSEKICKD
CGGHRLKPESLAVKVAKKSLGEILDMSIEDSTAFFADEKNFSYLSEQQKLISKPILKEINERLFFLYDVGLGYLSLGRDA
RTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIVVEHDKMTIEEADFIVDIGPKA
GKFGGEVVFSGTYKELLKSKSETALYMNGKKQISQLQNRTQKEWLELKNVNINNIQDLSVKFPLQNLVAITGVSGSGKSS
LILQTLLPFAQEELNRVKKVKKLGGVQIEGLEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKA
GRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVVCDTCEGKRYNDATLEIKYKGKNISEILNMSVLEASEFFTAVPKIKQ
KLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSDTGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLKNSVFVI
EHNLDVIKNADYIIDMGPEGGVKGGKVISTGSVEKVAKEHKKTKSYTGYYLDLELKNARS

Nucleotide

• Length: 2823 bp

>NTDB_id=454331 IOO20_RS01890 WP_002867761.1 348985..351807(-) (uvrA) [Campylobacter jejuni strain RM1221]
ATGAACGATACCATAAAAATCATTGGCGCAAGAGAAAATAACCTAAAAAATATCCACCTTGAAATTCCCAAAAACAAACT
CATTGTTTTTACAGGACTGAGCGGAAGTGGAAAATCAACCCTTGCTTTTGGAACTCTTTATGCTGAAGGACAACGCCGTT
ATATAGAAAGTTTAAGTGCTTACGCCAGACAATTTTTAGATAAGGTAGGCAAACCTGATGTCGATAAAATCGAAGGTTTA
ACTCCAGCCATTGCCATAGATCAAAAAACTACTTCTAAAAATCCACGCTCTACTGTAGGAACCATCACTGAAATTTATGA
TTATCTAAGACTTTTATACGCAAGAGTTGGCATTCAACATTGTCATCAATGCGGACAAAAAATTTCATCTATGAGTGCAA
GTGATATAGTCAGTGAAATTTTAAAATTTCCAAAAGGTGCAAAAATCATCATCTACGCCCCACTCATACGAGAAAAAAAA
GGAACTTATGCAGATTTGCTTGAAAATTTACGCAACAAAGGTTATGTAAGAGCTCAAATTGATGGAGTTTTGGTAAGACT
TGATGAAGAAATTGAACTAGCCAAAACCAAAAAACACACCATTAAACTTGTCATAGATAGGCTTGAAATTCAAGAAGATT
TACTTTCTCGTCTTGCAAGCGATATAGAAAAAGGCTTACAAGAAAGCTTTGGAGAAATAGAAATAGAAGTTTTAAATCAT
GAGGAAATAAACCTTAATAAACACTATCATTTTAGCGAGCATTCAGCTTGTTTTGATTGTAAAATTTCCTTTGTTCCACT
CGAGCCTTTAAGCTTTTCTTTTAATTCTCCAAAAGGAGCATGTGAAGCTTGCGATGGACTTGGAATTCGTTATACTTTAG
ATATGAAAAAAATCATCGATGAAAATTTAAGTCTCGAAAACGGTGCTGTTAAAATCATGTATGGTTTTAATAAAAGTTAT
TATTATAAATTCCTAATCGCCTTTTGCGAACAAAATGAAATTCCTATCAAAATACCTTTTATGCAATTAAACGAAGTACA
AAAACGTCTTGTATTGTATGGTAATGCCAAAACTATAGAATTTCTTTGGAAAAGAAATCGCCTAAAACGCACTTTTGAAG
GCGTGGTTAAAATGGCTTATGAAATGCTAAAAGATGAAAAAGATTTAGCTGAATATATGAGTGAAAAAATTTGTAAAGAC
TGCGGTGGGCATCGTTTAAAACCCGAAAGTTTAGCCGTGAAAGTAGCCAAAAAAAGCTTGGGTGAAATTTTAGATATGAG
CATAGAAGATAGTACGGCCTTTTTTGCAGATGAGAAAAATTTTTCTTATTTAAGCGAGCAACAAAAACTTATTTCTAAAC
CTATCCTAAAAGAAATCAACGAAAGATTGTTTTTCTTGTATGATGTGGGGCTAGGTTATCTTTCTTTAGGGCGCGATGCA
AGAACGATTAGTGGGGGTGAAGCACAAAGAATCCGCATAGCTTCACAAATTGGCAGTGGTTTAAGCGGAGTGATGTATGT
CTTAGATGAGCCTAGCATAGGACTTCATGAAAGAGATACTGCAAAACTGATTAAAACTTTAAGAAATTTACAACAAAAGG
GCAATACCCTAATTGTCGTAGAGCATGATAAAATGACCATAGAAGAAGCAGATTTTATTGTAGATATTGGTCCAAAAGCA
GGAAAATTTGGGGGTGAGGTTGTATTTAGTGGAACTTATAAAGAACTTTTAAAAAGCAAAAGCGAAACTGCACTTTATAT
GAATGGTAAAAAACAAATTTCGCAACTTCAAAACAGAACACAGAAAGAATGGCTTGAGCTTAAAAATGTAAATATTAACA
ATATCCAAGATTTAAGCGTAAAATTTCCTTTGCAAAATTTAGTCGCTATAACAGGAGTTTCAGGTTCTGGAAAAAGCTCT
TTGATACTTCAAACCCTACTTCCTTTTGCACAAGAGGAATTAAACCGTGTGAAAAAAGTTAAAAAACTTGGCGGAGTACA
AATAGAAGGACTTGAAAAACTTGATAAAGTCATTTATCTTGATCAAAGCCCAATTGGGCGCACACCACGTTCAAATCCTG
CCACCTATACAGGTGCTATGGATGAAATCAGAAATCTTTTTGCCGCCACTAAAGAAGCCAAAATGCGTGGTTATAAAGCT
GGACGCTTTTCTTTTAATGTCAAGGGTGGAAGATGTGAGAAATGTAGCGGAGATGGAGAAATCAAAATAGAAATGCATTT
TTTACCTGATGTTATGGTAGTTTGTGATACTTGCGAGGGCAAACGCTACAATGATGCCACGCTAGAAATCAAATATAAAG
GCAAAAATATCAGTGAAATTTTAAATATGAGTGTTTTAGAAGCGAGTGAATTTTTTACAGCCGTTCCTAAAATCAAACAA
AAATTAGATACTCTAGTAAAAGTGGGTTTAGATTATCTAACTCTAGGACAAAATGCCACCACCTTAAGTGGAGGTGAAGC
ACAAAGAATCAAACTTGCTAAAGAACTAAGCCGTAGCGATACAGGAAAAACGCTTTATATACTTGATGAACCTACAACAG
GACTGCATTTTGAAGATGTCAATAAACTCATCTTAGTTTTACAACATTTAGTTGATCTTAAAAATTCTGTTTTTGTGATA
GAACATAATTTAGATGTGATTAAAAATGCTGATTATATCATCGATATGGGGCCTGAAGGCGGAGTTAAAGGTGGAAAAGT
TATAAGCACAGGAAGCGTGGAAAAAGTCGCTAAAGAGCATAAGAAAACAAAATCCTATACAGGATATTATTTAGATCTAG
AGCTTAAAAACGCAAGGAGTTGA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (294-386)

• ABC transporter (ABC_tran) (616-852)

• UvrA interaction domain (UvrA_inter) (132-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	51.945	100	0.526
uvrA	Streptococcus pneumoniae TIGR4	51.945	100	0.526
uvrA	Streptococcus pneumoniae D39	51.945	100	0.526