Detailed information    

insolico Bioinformatically predicted

Overview


Name   kre   Type   Regulator
Locus tag   I33_RS07365 Genome accession   NC_017195
Coordinates   1452330..1452794 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1447330..1457794
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS07350 (I33_1577) kinA 1447797..1449617 (+) 1821 WP_014476652.1 sporulation histidine kinase KinA -
  I33_RS07355 (I33_1578) dapX 1449627..1450808 (-) 1182 WP_014476653.1 aminotransferase A -
  I33_RS20235 (I33_1579) - 1451010..1451171 (-) 162 WP_014476654.1 hypothetical protein -
  I33_RS07360 (I33_1580) cheV 1451375..1452286 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  I33_RS07365 (I33_1581) kre 1452330..1452794 (-) 465 WP_003232406.1 YkyB family protein Regulator
  I33_RS07370 (I33_1582) ykuC 1452920..1454212 (-) 1293 WP_014476656.1 MFS transporter -
  I33_RS07375 (I33_1583) ltdD 1454288..1454782 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  I33_RS07380 (I33_1584) ppeE 1454839..1455699 (-) 861 WP_014476658.1 metallophosphoesterase -
  I33_RS07385 (I33_1585) fadH 1455842..1456606 (+) 765 WP_014476659.1 2,4-dienoyl-CoA reductase -

Sequence


Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=45403 I33_RS07365 WP_003232406.1 1452330..1452794(-) (kre) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=45403 I33_RS07365 WP_003232406.1 1452330..1452794(-) (kre) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTGTTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCTGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains


Predicted by InterproScan.

(14-128)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment