Detailed information NTG0045396

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: A7A1_RS07915
• Genome accession: NC_019896
• Coordinates: 1540081..1541208 (+)
• Length: 375 a.a.
• NCBI ID: WP_015251664.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. BSP1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1535081..1546208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A7A1_RS07890 (A7A1_0843)	-	1535471..1535935 (-)	465	WP_015251659.1	SMI1/KNR4 family protein	-
A7A1_RS07895 (A7A1_0844)	-	1535949..1537715 (-)	1767	WP_015251660.1	T7SS effector LXG polymorphic toxin	-
A7A1_RS07900 (A7A1_0845)	-	1538085..1538243 (-)	159	WP_015251661.1	hypothetical protein	-
A7A1_RS07905 (A7A1_0846)	-	1538354..1538488 (-)	135	WP_015251662.1	hypothetical protein	-
A7A1_RS07910 (A7A1_0847)	-	1538627..1539301 (-)	675	WP_015251663.1	TraX family protein	-
A7A1_RS21945	-	1539606..1539686 (-)	81	Protein_1563	RNA polymerase subunit sigma	-
A7A1_RS07915 (A7A1_0848)	rapC	1540081..1541208 (+)	1128	WP_015251664.1	Rap family tetratricopeptide repeat protein	Regulator
A7A1_RS21950	-	1541551..1541640 (+)	90	Protein_1565	hypothetical protein	-
A7A1_RS07925	-	1542142..1543240 (+)	1099	Protein_1566	glycosyl hydrolase	-
A7A1_RS21955	-	1543884..1544062 (+)	179	Protein_1567	hypothetical protein	-
A7A1_RS07930 (A7A1_0850)	spoIVCA	1544020..1545480 (+)	1461	WP_235701260.1	site-specific DNA recombinase SpoIVCA	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44234.49 Da
• Isoelectric Point: 5.6727

>NTDB_id=45396 A7A1_RS07915 WP_015251664.1 1540081..1541208(+) (rapC) [Bacillus subtilis subsp. subtilis str. BSP1]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIDE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYIDFKRYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
FMKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQHGVNQTI
EYLEKNKNYSYVEDIACETADAYANLKEFETSYVYHQKMVETQTQIQRGECLYDF

Nucleotide

• Length: 1128 bp

>NTDB_id=45396 A7A1_RS07915 WP_015251664.1 1540081..1541208(+) (rapC) [Bacillus subtilis subsp. subtilis str. BSP1]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTTCC
GGATGCAGAGATTTTAAAGGCAGAGGTGGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAACTCATGTTAGATTATTTGGAACCAGTAACAACACGTATAAGACCAACTATTGACGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGTCTTTTGTCGTATTATTCTCTGTTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCTGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGGAAAGTTCAATGTATGTTTGTTATTTCAGG
GAATTATATAGATTTTAAACGTTATGAAAAAAGTCAGCCGCATCTTGAAAAAGCATTAGAGTTATCGAGGGAATTGAATA
ACAAGAGGTTGATTAGTTCTGCGTTATATAATTTAGGCACAAATTTTGCTGACAGTGGCGATTACGAGCAAGCGGAAGTA
TTCATGAAGCAAGCTGTGGAGATAACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAAGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGTTATTTAAAAGCTCTTTACGTCGATGCGGTGGATCAACATGGAGTTAATCAAACCATA
GAATACTTAGAGAAGAATAAGAACTATTCTTATGTTGAAGACATTGCCTGTGAGACCGCAGATGCTTATGCAAACTTAAA
AGAATTTGAAACATCTTATGTTTACCATCAGAAAATGGTTGAAACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-287)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (193-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	43.883	100	0.44
rapF	Bacillus subtilis subsp. subtilis str. 168	39.418	100	0.397